Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11074 ATGGAGGTGGGTATGCTACCAATTTCAGCATCAAAGAGAGGAAAGCTCTTAGCAGCTGGTTACACCACTCTCGATGCCATTGTTCGTTCATCCCCCACCCAACTTGCTCGAGATATACAAGTCTCTGATAGTGAAGCTTCAGAAATTCTGAAATATGCAACCAAAACTAATGCTTTAGACAGATCAAATGGGAGGAGTAACAGTACTGTTGTTGATGGTGGTCAGACTGCTTGGGATATGCTCAATGAGGAAAAGTTTTCTTCTCACATTACCACATCTTGTGTGGATCTGGATAACATCCTTGGTGGAGGGATTAAATGCAAAGAAGTCACTGAAATAGGTGGAGTTCCAGGCATTGGTAAAACGCAATTTGGGATTCAACTTGCAGTAAATGTTCAAATTCCACTAGAATATGGTGGCCTAGATGGGAAGGCAATATACATTGACACAGAAGGAAGCTTTATGGTTGAACGTGTTCTGCAAATTGCTGAAGCATGCATAGAAGACATGTCAGAATATAGTCACCACTTTCACAAGGATATTCAAGATTGCGTAGTTAAAATGCATCCGAATAGTATCTTGGAAAATATATTCTATTTTCGTGTTTGCAGCTATACTGAACAAATTGCTTTGGTAAATTACTTAGACAAATTCATTTCCGAGCATAAAGATGTAAAGATCATCATTATTGACAGTGTTACTTTCCACTTCCGCCAAGACTTTGGTGATATGGCTCTCAGGACTCGATTACTTAGTGAAATGGCTTTAAAGTTGATGAAGCTTGCAAGAAAGTTCTGTTTGGCTGTAAGAATCAATTTATTTTGCTTTCCAGAGGCGTTTTGTATTGAACTTAATCTTTGA 861 0.3879 MEVGMLPISASKRGKLLAAGYTTLDAIVRSSPTQLARDIQVSDSEASEILKYATKTNALDRSNGRSNSTVVDGGQTAWDMLNEEKFSSHITTSCVDLDNILGGGIKCKEVTEIGGVPGIGKTQFGIQLAVNVQIPLEYGGLDGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDIQDCVVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFISEHKDVKIIIIDSVTFHFRQDFGDMALRTRLLSEMALKLMKLARKFCLAVRINLFCFPEAFCIELNL. 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11074 286 PIRSF Rad51 1 272 IPR016467 -
Seca4g11074 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 269 IPR027417 -
Seca4g11074 286 CDD Rad51C 108 269 - -
Seca4g11074 286 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 269 - -
Seca4g11074 286 Gene3D - 70 271 IPR027417 -
Seca4g11074 286 ProSiteProfiles RecA family profile 1. 86 275 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Seca4g11074 286 Pfam Rad51 75 271 IPR013632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11074 Seca-Chr4 249042394 249046283 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11074 K10870 - gmx:100527406 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11074 4 249042394 249046283 Seca4g11074 4 249042394 249046283 ECH