Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11070 ATGTCTACTATAGCACGCAAAGGAATCCATTACATGCAGAAACTAAATGCAGCAAATGTATCTAGTGCTTTGCTGGAGAAAGGCCAAAATCGTGTGATAGAGGCTTCGCTTACGCTTATTAGAGAAAGAGCAAAGCTTAAGGCATGTCACATTCACGGAGAACTTGTGCGTGCTTTGGGAGGTGCTGTAGCAACTTCATCTCTTCTAGGAGTTCCTTTGGGACACAATTCATCATTCCTTCAAGGACCTGCATTTGCACCTCCTCGCATTAGAGAGGCCATTTGGTGTGGTAGCACCAACTCCACGACTGAAGAAGGCAAAGAATTACAAGATGCACGAGTGCTAACTGATGTAGGTGATGTTCCTATCCAAGAAATACGAGATTGTGGGGTAGATGATGACAGATTGATGAATGTCATTGGTGAATCTGTCAAGTTAGTGATGGAGGAGGCACCATTACGTCCCTTAGTTTTAGGCGGTGATCACTCAATATCATTTCCAGTTGTTAGAGCTGTCTCTGAGAAGCTTGGAGGACCACTTGATGTTCTTCATCTTGACGCGCATCCTGATAACTATGATGCCTATGAAGGAAACATTTATTCACATGCTTCTTCTTTTGCTCGGATCATGGAGGGTGACTATGTCCGGCGACTCTTGCAGGTTGGTATTAGATCAATAACTGCAGAAGGGCGTGCACAAGCCAAAAAGTTTGGGGTAGAGCAATATGAAATGCGAACATTTTCAAGAGATCGCCACTTTTTAGAGAACCTGAAACTAGGGGAAGGTGTTAAAGGGGTATATATCTCAATAGATGTGGATTGTCTTGATCCTGCCTTTGCTCCAGGAGTGTCTCACATAGAACCAGGAGGTCTTTCTTTCCGTGATGTTCTCAACATCCTTCACAATCTTCAAGGTGATGTTGTTGCTGGAGACGTGGTTGAATTCAACCCACAACGCGATACCGTTGATGGAATGACTGCCATGGTAGCTGCTAAGCTTGTGAGAGAAATGGCTGCAAAGATTTCAAAATGA 1032 0.4399 MSTIARKGIHYMQKLNAANVSSALLEKGQNRVIEASLTLIRERAKLKACHIHGELVRALGGAVATSSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELQDARVLTDVGDVPIQEIRDCGVDDDRLMNVIGESVKLVMEEAPLRPLVLGGDHSISFPVVRAVSEKLGGPLDVLHLDAHPDNYDAYEGNIYSHASSFARIMEGDYVRRLLQVGIRSITAEGRAQAKKFGVEQYEMRTFSRDRHFLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVAGDVVEFNPQRDTVDGMTAMVAAKLVREMAAKISK. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11070 343 ProSitePatterns Arginase family signature. 269 290 IPR020855 GO:0016813|GO:0046872
Seca4g11070 343 SUPERFAMILY Arginase/deacetylase 67 339 IPR023696 -
Seca4g11070 343 PANTHER ARGINASE/AGMATINASE 6 343 IPR006035 GO:0046872
Seca4g11070 343 PIRSF Arginase 61 343 IPR006035 GO:0046872
Seca4g11070 343 Gene3D Ureohydrolase domain 60 343 - -
Seca4g11070 343 FunFam Arginase 1, mitochondrial 56 343 - -
Seca4g11070 343 Pfam Arginase family 67 337 IPR006035 GO:0046872
Seca4g11070 343 CDD Agmatinase-like_2 68 338 - -
Seca4g11070 343 ProSiteProfiles Arginase family profile. 57 343 IPR006035 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11070 Seca-Chr4 249013375 249017336 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11070 K01476 - gmx:100789799 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11070 4 249013375 249017336 Seca4g11070 4 249013375 249017336 ECH