Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11068 ATGCCATCTCTTCCTCTTCGCAACAACGCTTCTCCACTCTTCCATTTTCTTCCATCAACCACCTCCCTCATTCCCTCCTTCAACCACCTTTCCTCAACCCAATTACAAGTACAAGCCATGAGTTCCTTTTCTTCTTCTTCTTCTCTTCCTTCCACATCCAACCACCCCCAACAACAGCAAAACATTGATGAACACAAACTTTCCCATGTGCTCAAATACCACAACCAAACCAAGCACAATTTCAACCGCTATGCCAGAGGACCCCATGGTCTCGATTGGGCCAACCAGCCCAACCCATTTCGCAGGTACCTCTCTTCCCCTCTCTTGTCTCTCCTCCACCCTCCAACTGAGCAAGAAGCACAAGTACCCCTTTACTCTTCTCTCTTCCATTCTCTTCCCTCTCCAAAACCCATTTCTAAATCCACCATTTCCCAGTTCCTCTACGATTCTCTTGCCCTTTCCGCTTGGAAAACTACTGGCTTTTCCACCTGGTCCCTCAGGGTGAACCCCAGTAGTGGCAATTTGCACCCCACTGAGGCTTACATCGTTGCACCTCCTATTGAGTCACTCTCTGATTCCCCTTTTGTTGCTCATTACGCTCCAAAGGAGCATGCTTTGGAGCTTAGAGCTCAAATCCCATCTGGGTTTTTCCCCAAGTTTTTCCCCCTTAATTCCTTTCTTGTGGGGTTGTCCTCTATTTTCTGGCGTGAGGCTTGGAAGTATGGGGAGCGTGCTTTTAGGTACTGTAACCATGATGTTGGACACGCCATTGCTGCGGTTTCAATGGCTGCTGCTGGTCTTGGTTGGGATGTGAAGCTTTTGGACTCTTTGGGGTGTGAAGAGTTGAAGAGTCTTATGGGGCTTCATGTTTTCCCGGAATTTGAAGTTCCATCACGTGCTGTTAAAGGGAAGATTCCAGAGATTGAGTTTGAGCACCCGGATTGTGTCATGCTGGTTTATCCAAGTGGAGTTGGTGGGTTTGATGTGAATTATAAGGAGTTAAGTTCTGCCATATTGGAGTTCTCTGAATTGGAGTGGAAAGGGAAGCCTAATTCCCTTAGCAAAGAGCATGTGTGTTGGGATATTATATATAGAACTGCTGAGGTTGTGAAAAAGCCTTTGACATTGGAACATAGGTTCTTGGTTGATCCATTTCAAAGGAGTGGCCTTTGTAGTGAAACATCATATAAGGGCTTTACTGTGAGGCAAGTTGTTAGGAAGCGGAGAAGTGCTGTAGATATGGATGGAGTTACAAAAATTGAGAGGGATACATTTTATCAGATTCTATCACACTGTCTTCCTTCAGGTTGTCAAGCTGGAGAGAAGCAAAGGAGACAGCTTGCATTGCCATTCCGAGCCCTTCCTTGGGATGCTGAGGTGCATGCTGCTTTGTTTGTTCATAGAGTGGAGGGGTTACCTCAAGGCTTGTATTTCCTGGTGAGGAATGAAAATCACTTTGATGAGTTGAAGAAAGCTATGAAGCCTGACTTTGTCTGGACCAAGCCAGAGGGCTGCCCTGATGATCTTCCTCTCTACGAACTCCTAAGATCTGATTGCCGGCGGCTTGCCAAACAGCTTTCGTGCCATCAGGATATTGCAAGTGATGGTTGCTTCAGCCTTGGTATGTTGGCTCGAATGGAGCCTACTTTGCGTGAAAAGAATGTCTGGATGTATCCACATTTATTTTGGGAGACTGGAGTCCTTGGACAGGTGTTGTACCTTGAAGCACATGCTGTTGGAATCTCAGCAACTGGAATTGGTTGCTTCTTTGATGACCCTGTGCATGAGTTGCTTGGGTTAAAAGGGTCAACCTTCCAGAGCCTCTATCATTTTACTGTTGGAGGTCCTGTCTTAGACAAGCGTATAATGAGTTTACCAGCATATCCAGGCCCTAATGTAGATGCTTGA 1908 0.4628 MPSLPLRNNASPLFHFLPSTTSLIPSFNHLSSTQLQVQAMSSFSSSSSLPSTSNHPQQQQNIDEHKLSHVLKYHNQTKHNFNRYARGPHGLDWANQPNPFRRYLSSPLLSLLHPPTEQEAQVPLYSSLFHSLPSPKPISKSTISQFLYDSLALSAWKTTGFSTWSLRVNPSSGNLHPTEAYIVAPPIESLSDSPFVAHYAPKEHALELRAQIPSGFFPKFFPLNSFLVGLSSIFWREAWKYGERAFRYCNHDVGHAIAAVSMAAAGLGWDVKLLDSLGCEELKSLMGLHVFPEFEVPSRAVKGKIPEIEFEHPDCVMLVYPSGVGGFDVNYKELSSAILEFSELEWKGKPNSLSKEHVCWDIIYRTAEVVKKPLTLEHRFLVDPFQRSGLCSETSYKGFTVRQVVRKRRSAVDMDGVTKIERDTFYQILSHCLPSGCQAGEKQRRQLALPFRALPWDAEVHAALFVHRVEGLPQGLYFLVRNENHFDELKKAMKPDFVWTKPEGCPDDLPLYELLRSDCRRLAKQLSCHQDIASDGCFSLGMLARMEPTLREKNVWMYPHLFWETGVLGQVLYLEAHAVGISATGIGCFFDDPVHELLGLKGSTFQSLYHFTVGGPVLDKRIMSLPAYPGPNVDA. 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11068 635 SUPERFAMILY FMN-dependent nitroreductase-like 136 288 IPR000415 GO:0016491
Seca4g11068 635 Gene3D NADH Oxidase 90 307 IPR000415 GO:0016491
Seca4g11068 635 SUPERFAMILY FMN-dependent nitroreductase-like 478 619 IPR000415 GO:0016491
Seca4g11068 635 CDD McbC_SagB-like_oxidoreductase 149 298 - -
Seca4g11068 635 CDD McbC_SagB-like_oxidoreductase 401 615 - -
Seca4g11068 635 Gene3D NADH Oxidase 372 616 IPR000415 GO:0016491
Seca4g11068 635 PANTHER NITROREDUCTASE FAMILY PROTEIN 33 635 - -
Seca4g11068 635 Pfam Nitroreductase family 135 288 IPR029479 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11068 Seca-Chr4 248969137 248973508 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11068 - - lja:Lj3g3v2741820.1 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11068 4 248969137 248973508 Seca4g11068 4 248969137 248973508 ECH