Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11043 ATGAGGGATCCGAATCTGGAGTTGCAGGAGTCGGGTTGGGAGGAACTGCGAAAGGAAGCGCGCAAGATCGAGGGCGATCTCGACGTCAAGCTTTCTTCCTACGCAAAACTCGGCGCTAGGTTCACCCAAGGAGGTTATGTGGATAGTGGTTCACCACCTCTTGGGTCCAGTAGGTCTTGGAAGTCCATGGAAATGGAAATCCAGTCCTTGCTGGAGAAACTATTGGACATAAATGATTCAATGAGTAGATGTGCTGCATCTGCTGGACCAGCTACTTCTGTAACTCAAAAGTTGGCTAGGCACAGAGATATTCTTCATGAGTTTACCCAGGAATTTAGGCGTATCAAGGGAAACATAAACTCAATGAGGGAACATGCAGAGCTTCTGAGTTCCGTCAGGGACGATATTACTGACTTTAAGACATCGGGTAGTATGTCACCAAGGATGCAGTTACTACGTGAGAGAGCGGCCATCCATGGAAGTATATCTCATATAGATGATGTCATTAGTCAAGCTCAAGCAACAAGAACTGTCTTGGGTTCTCAGAGGGCATTGTTTGGCGATGTTCAAGGAAAAGTGAAGCTTCTTGGCGACAAGTTCCCCATTATTCGTAGCCTGCTTGGTTCTATAAGAAGGCGACGCTCAAGGGACACTCTTATTCTGTCAGCAGTAATTGCTGCTTGTACATTGTTTCTCATCATTTATTGGCTCTCAAAGTAA 720 0.4597 MRDPNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDSGSPPLGSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLSSVRDDITDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRTVLGSQRALFGDVQGKVKLLGDKFPIIRSLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11043 239 PIRSF Golgi_SNARE 7 238 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Seca4g11043 239 PANTHER GOS-28 SNARE- RELATED 9 238 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Seca4g11043 239 Pfam Snare region anchored in the vesicle membrane C-terminus 150 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11043 Seca-Chr4 248392678 248401955 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11043 K08495 - gmx:100781813 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11043 4 248392678 248401955 Seca4g11043 4 248392678 248401955 ECH