Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11010 ATGCCGAAACGCGACACATCCGATTCCGAATCCGAGGATGTTTCAAGCTCAAACTCTGAGTCAGAGGAGGCTGAAACCGTGCGCAATGAGAAACCCCAACAGCATGGAATGTCGAAATACGAGGAACAGAGGCTGCAGAGAATTGCGGAGAACAGAGCAAGGTTAGAGGCTCTAGGGCTGCCCCAAATGGCCTCCTCCTTGAAGGGCTTGCCTCGGAACAAGAAGAAGGGCAAAGAGAAGGTTAAAGACGATGATGAAGAGTATAGACCCGAAGACGAGGCTGAACCCGGGTCTGCTTCTTCCAGCGAACAAGATGAGGACTTTGCAATTGAAAATGCTTCTGGGTCACGGAAAAGGAAGGTGAAGAGCAATGGTTTGAAAATGAAAGCTAAAGCCTCTGGGAAGAAGCATGGTAGTAATTCAGAGTACATTGATGAGGATGAAGCTTTGAGGCAGGCAATTGCTCTTTCCTTGCAAGACTCTGCAGCAGTTTCAAATTGCTCTAACAAGAATGTAGTGAGCATCAGCAAGGCTGAGAAAAAGGGAAACATTCACATTCAAGAAGATAAGGGAAGAAAGAAGAACAAAAAATCGTTTACAAGTCGGCTGCAAATGACTGAGGATGAACTCATTGTACACTTCTTCCAGATTGATGGTAATTCGATTATTTCTGTTGTTGCTACTTTTGCTTAA 693 0.4517 MPKRDTSDSESEDVSSSNSESEEAETVRNEKPQQHGMSKYEEQRLQRIAENRARLEALGLPQMASSLKGLPRNKKKGKEKVKDDDEEYRPEDEAEPGSASSSEQDEDFAIENASGSRKRKVKSNGLKMKAKASGKKHGSNSEYIDEDEALRQAIALSLQDSAAVSNCSNKNVVSISKAEKKGNIHIQEDKGRKKNKKSFTSRLQMTEDELIVHFFQIDGNSIISVVATFA. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11010 230 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 145 164 IPR003903 -
Seca4g11010 230 MobiDBLite consensus disorder prediction 120 134 - -
Seca4g11010 230 MobiDBLite consensus disorder prediction 1 143 - -
Seca4g11010 230 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11010 Seca-Chr4 248027528 248031320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11010 32 225 EF-hand Containing Proteins AT1G73440 32.195 3.99e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11010 - - gmx:100806103 254.988