Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10990 ATGAAGTTTGGAAAGAGACTGAAGAAACAGATTCAGGAGTCCCTGCCGGAATGGAGAGACAAGTATTTGTCGTACAAGGAATTGAAGAAGCTTGTGCGGCTGATTTCGGCGGCACCAACGTTGTTGAATACTAGGTCTCTGGAGTACGGCAAGGCTGAGGCTGAGTTTATGTATTTGTTGAACAATGAAATTGACAAGTTCAATGCCTTCTTCATGGAAAAAGAGGAGGATTTCATTATTCGCCATAAGGAAGTACAGCAGAGAATCAAGATAGTAGTTGAATTATGGGGACCAAATGGTAGTCATCCTTCAGAAGAGGATTATAAGGAGGAGATGGCTAAAATCAGAAAAGCTATTGTTGATTTCCATGGTGAAATGGTTCTCTTAGTAAACTACAGCAATATTAATTATACAGGGTTGGCTAAGATTCTGAAGAAATATGACAAAAGAACAGGGTGTCTCTTGCGTTTACCATTCATTCAGAAAGTATTGGAGCAGCCCTTTTTCACAACCGATTTAATTTCAAAACTTGTGAAGGAATGTGAAAGCATAATTGATGCAGTGTTCCCAGCTGAGGAAGAAGCTGAAAGGGCAAAAGAAGCAATTGTAGTAGCTGGAGAAGGAATTTTTAGAAACACAGTTTCAGCTTTACTTACAATGCAAGAGATAAGAAAAGGTAGCTCCACACAGAGTCCCTTTTCTCTGCCTCCTCTAAACTTGCCAGACTCTGATCTCATCCAATCAATACAGCTCAATGCTGCTGTGCCCATTGTCTAG 777 0.4041 MKFGKRLKKQIQESLPEWRDKYLSYKELKKLVRLISAAPTLLNTRSLEYGKAEAEFMYLLNNEIDKFNAFFMEKEEDFIIRHKEVQQRIKIVVELWGPNGSHPSEEDYKEEMAKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGCLLRLPFIQKVLEQPFFTTDLISKLVKECESIIDAVFPAEEEAERAKEAIVVAGEGIFRNTVSALLTMQEIRKGSSTQSPFSLPPLNLPDSDLIQSIQLNAAVPIV. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10990 258 CDD SPX_AtSPX1_like 2 150 - -
Seca4g10990 258 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 240 IPR031142 GO:0016036
Seca4g10990 258 ProSiteProfiles SPX domain profile. 1 161 IPR004331 -
Seca4g10990 258 Pfam SPX domain 1 37 IPR004331 -
Seca4g10990 258 Pfam SPX domain 103 163 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10990 Seca-Chr4 247778108 247781858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10990 - - gmx:100778590 443.736