Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10985 ATGTGGACGCATCAACTGCTACCTTTACCACCACTGAAACTCTTCCTCTGTTGTTCACCTCCAAATGTTACAAAAAGACCATCTTTTGTAGAACTGTGTTGGACCCAGAAGGGTAAAAATCGCTATAGCAGAGTAAAGGCAATATCTTTGGATGAACTTCCCCCAAACGCCCTTCGCAGAGGAGGCTTCACCCTTGGAGTGGACTTGGGAATGGCTCGCACTGGCCTTGCCCTCAGCAAAGGCTTCTCTATTCGCCCTTTAACTGTTTTGGAACTGCGAGGACAGAAGCTTGAGGTCCAGATGATTAACATTGCTGAACAAGAGGAGGCTGATGAGTTTATAGTTGGACTTCCAAAATCTTTTGATGGGAAGGAAACGCCACAGTCAAATATAGTCCGTAGTGTTGCAGGAAGGCTTGCTGTTCGAGCTGCAGAGAGGGGTTGGAGAGTATATCTACAGGATGAACATGGAACAACAACAGAAGCTGTAGATCGAATGGTCAACATGTAA 510 0.4608 MWTHQLLPLPPLKLFLCCSPPNVTKRPSFVELCWTQKGKNRYSRVKAISLDELPPNALRRGGFTLGVDLGMARTGLALSKGFSIRPLTVLELRGQKLEVQMINIAEQEEADEFIVGLPKSFDGKETPQSNIVRSVAGRLAVRAAERGWRVYLQDEHGTTTEAVDRMVNM. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10985 169 Gene3D - 64 169 IPR037027 GO:0006139
Seca4g10985 169 CDD YqgF 65 169 IPR005227 GO:0006364
Seca4g10985 169 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 53 169 IPR005227 GO:0006364
Seca4g10985 169 Pfam Holliday junction resolvase 64 166 IPR005227 GO:0006364
Seca4g10985 169 SMART rnase_8s 62 162 IPR006641 GO:0006139
Seca4g10985 169 SUPERFAMILY Ribonuclease H-like 63 168 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10985 Seca-Chr4 247715668 247720371 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10985 - - lja:Lj1g3v0294720.2 275.018