Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10944 ATGGAGGAGCATGTAGCAGCCTTGCACACTGCTACTAACGCTTTGCAAGCATTAGGAAGGGGCTTTGATGTGAACTTCGATACGAGGTTGCTTTATTGCAAAGGAGTTTCAGGGTCTAGGTTAGTTGCGATTGATGAAGAACACACGTGGGACCTGTGGTTGTACGATGATGTGGTTGTTCCCAAAGTTTCCAGGGACATTAGATGTGTTCAGGAGTACATGGAGCGTCAGAGTTCTGGGGTCTGCAGTTTCCAGGAGATGGTGGAATATTTTAATCACAAGGCTGATATATCAGGGAGCTATCCTCTTGGGAGCTTTAACTCTGCATTTAGCTTCACTGGTTCAAAACATGTTGATTCTGCAGCCACAAAAACCTTGTCTTCAGATGGATTTTACATTTGCCTTGCAAAGATTCAGCTAAAGTCCCACTTAATATTACAAGACAATGTCAAAAGGGCTGTCCCTGTCAATTGGGATCCACCGTCCTTGGCAAGCTTTATTGAAAATTTTGGGACACATGTCATCACATCAATAACTATTGGTGGTAAAGATGTTATTTATGTCAAACAACACCATACTTCGCCTTTGTCAAAGTTGGAGATAAAAAACTATATTCAGGATATCGGAAATCAGAGGTTCTCTGACATCAACAGCCATACCAGTTCAGGTCAAACAAAATCCAAGGATAAGGGCGTTGATTCATTTTCGTTCAATAGTCAAGGGATTTATCCTCAACCCACCACTGCAACATATCCTACTGGGAAAGAAGATGTCACAGTCATTTTTAGAAGAAGAGGAGGAGATGATTTGGAACAAAACCACAGTGTATGGATAAAAACTGTCAAGTCCTCCCCAGATATCATTGAGATGACTTTCTGTCCTATAACAGATCTTCTTGATGAAATACCTGCCAAGGAGCATTTGACGCGTGCCATTGGTCTTTATCTTGAATATAAGCCTCCAATTGAAGAACTTAGATATTTCCTAGAGTTTCAGATTCCTCGTATCTGGGCTCCTTTACAGGACAGGATTCCTGGGCAACAAAGGAAGGAACCTGTGTGCCCATCTTTGCAATTCAGTATAATGGGCCAGAAGCTTTACGTTAGTCAAGAACAGATTACAGTTGGACGTAGGCCAGTAACCGGCATACGTCTTTGTCTAGAAGGAAGCAAGCAGAACCGGCTGAGTGTTCATCTTCAACACTTGGTATCCCTTCCAAAAATCCTTCAGCCACATTGGGACAGCCACATAGCTATTGGTGCTCCCAAGTGGCAGGGGCCCGAGGAACAAGATAGCAGGTGGTTTGAGCCTGTTAAGTGGAAGAATTTTTCTCATGTTAGCACTGCTCCCATTGAGAACCCTGAAACATTCATAGGAGACTTCTCTGGTGTCTACGTAGTCACTGGAGCACAGCTTGGAGTGTGGGATTTTGGATCACGGAATGTGTTGTACATGAAGCTCTTGTATTCAAGGTTACCTGGCTGCACAATCCGAAGGTCACTGTGGGATCACATCCCGAACAAGTCATCCAAAACTGTGAATGCTGGGAACACTTCCAACCCAGATGACTCAAGTGTAACCACCACCATAGGGAACAAGTTGGTGAAGTATGTTGACTTGTCTGAAATGAGCAAAGGACCCCAAGATCCTCCTGGCCATTGGTTAGTTACTGGTGGAAAGCTTGGTGTTGAAAAAGGGAAAATTGTTTTGAGACTGAAATATTCCTTGCTTAATTACTGA 1740 0.4339 MEEHVAALHTATNALQALGRGFDVNFDTRLLYCKGVSGSRLVAIDEEHTWDLWLYDDVVVPKVSRDIRCVQEYMERQSSGVCSFQEMVEYFNHKADISGSYPLGSFNSAFSFTGSKHVDSAATKTLSSDGFYICLAKIQLKSHLILQDNVKRAVPVNWDPPSLASFIENFGTHVITSITIGGKDVIYVKQHHTSPLSKLEIKNYIQDIGNQRFSDINSHTSSGQTKSKDKGVDSFSFNSQGIYPQPTTATYPTGKEDVTVIFRRRGGDDLEQNHSVWIKTVKSSPDIIEMTFCPITDLLDEIPAKEHLTRAIGLYLEYKPPIEELRYFLEFQIPRIWAPLQDRIPGQQRKEPVCPSLQFSIMGQKLYVSQEQITVGRRPVTGIRLCLEGSKQNRLSVHLQHLVSLPKILQPHWDSHIAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVYVVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHIPNKSSKTVNAGNTSNPDDSSVTTTIGNKLVKYVDLSEMSKGPQDPPGHWLVTGGKLGVEKGKIVLRLKYSLLNY. 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10944 579 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 329 IPR020864 -
Seca4g10944 579 Pfam MAC/Perforin domain 104 315 IPR020864 -
Seca4g10944 579 SMART MACPF_8 123 317 IPR020864 -
Seca4g10944 579 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 4 579 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10944 Seca-Chr4 247178662 247184796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10944 - - gmx:100817248 1053.12