Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10910 ATGGCTGGGATGAAGTTTGCATTGGTGGCTGTGATGTGCATGGCAGTGATGGTTGCACCCATGGCAGAGGCTGTAATCACATGCGGGCAGGTGACAAGCTCCTTGGCTCCATGCTTAGGTTTCCTTGGAGGTAAGGCTCCTGCTCCATCGACAGCATGCTGCAATGGAGTCAAGGCGCTCAACGGTGCTGCTCAGACCACCCCTGACCGCCAGGCCGCATGCAAGTGCTTGAAATCCGCTGCCGGTGCTATTGTTGGTTTCGATGCCGGTAAAGCAGCTTCACTCCCTGGCAAATGTGGAGTTAACATTCCCTACAAGATCAGCACCTCCACCAACTGCGCTACGCATCAAGTGATCTGA 360 0.5472 MAGMKFALVAVMCMAVMVAPMAEAVITCGQVTSSLAPCLGFLGGKAPAPSTACCNGVKALNGAAQTTPDRQAACKCLKSAAGAIVGFDAGKAASLPGKCGVNIPYKISTSTNCATHQVI. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10910 119 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 6 114 IPR000528 GO:0006869|GO:0008289
Seca4g10910 119 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Seca4g10910 119 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Seca4g10910 119 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Seca4g10910 119 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Seca4g10910 119 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Seca4g10910 119 CDD nsLTP1 26 113 - -
Seca4g10910 119 SMART aai_6 28 113 IPR016140 -
Seca4g10910 119 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 115 IPR036312 -
Seca4g10910 119 Pfam Protease inhibitor/seed storage/LTP family 28 113 IPR016140 -
Seca4g10910 119 FunFam Non-specific lipid-transfer protein 25 117 - -
Seca4g10910 119 Gene3D - 25 116 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10910 Seca-Chr4 246742666 246743748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10910 4 115 Acyl Lipid Metabolism Gene Families AT5G59310 58.621 7.38e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10910 - - gmx:100306510 144.436