Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10780 ATGTTTGGTGCATTGGTCGCTCAAGGTGAAAAAGCTGTTGTATCTTTGGAAATTCTTATCTCAAGTATTTCTGCTGACTTGCTTGCTGAGGTGGTAATGGCAAATATGCGTCACCTACCTCCAAAGTACCCTAATGCTGAAGGAGATGATGAGCAGTTGCATGACATTAGTATATTTGGTTCTGATGACAAGGCTAAATATCCACCATCATTTATAGCTGGTGTTATGTCACTTTCTAGTACTTTCCCACCAGTTGCTTCACTTCTTGATGCTCATCAATCAGTGTCCAATGATGTAGTGAAGTCTCATGGGGAGGAAGAAATTTCTTTAACTGGAATAGATAGTACTGTTGTGCATTCTGGGATGAATCTTTCAACTGAAAATGTACCATCACCTACTGATTATCCATCTTCTGATGCCTGTATACCTGGAGTGGAGAATGGAAGCACAACTATGCCTTCTGACATCCATGATGTTGGAAACTTTGAGAGTGGAATCCCTGGGCTGGATTCTTTTGGACGTAGTGATGCCATATCAGAAACTTTGGCTGCTTCCTCGTTGGCTTCCACTGAGATACAGCTAGAAGAGGCCAGTCAAGAGCAAGTTACGAGTTTGGATCAAAGGTCACCCCTGAACATGGTTCCATCAATATCAACAGATAGATCCGAGGAGCTGAGCCCAAAAGCAGTTGTTACAGATGTCAATAGCTTGGTGTCCTCAACAGCTACTTCAGTTGTGTTTCCTTCCCATTTAATCCTGCCAAAGATGATTGCTCCGGTTGTTGACCTTGCAGATGAACAAAAGGATCATTTGCAAAAGTTATGTTTTATGCGGATCATTGATGCATATAAGCAAATAGCTGTAGCTGGAGGCTCAAAAGTTCGATTTTCAATACTTGCTTATTTAGGAGTTGAGTTTCCCCTGGAGTTAGACCCATGGAAATTATTACAGAAGCATATTTTGATTGATTACACTAGTCATGAGGGACACGAGTTGACATTGCGTGTCCTATACAGGTTATTTGGTGAGGCTGAAGAGGAGTCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGTATATGAAACATTCCTCCTAGCTGTGGCTGAAGCACTTAGAGATTCCTTTCCACCTTCAGATAAATCATTAAGTAAATTGCTTGGTGAATCTCCTTATTTGCCAAAATCAGTTTTAAAAATTTTAGAAAATATGTGTTCTCCTGGAAATGGGGATAAAGTTGACAAGGAATCTCACTCATTGAATGCGGATAGAGTTACGCAAGGTCTAAGTGCAGTATGGAGTTTGATTCTTCTAAGACCTCCTATTCGAGATACTTGTTTAAAAATTGCTTTACAGAGTGCAGTACATCACTTGGAAGAAGTGCGTATGAAGGCAATACGTCTGGTGGCAAATAAGCTTTATCCTTTATCATCCATTTCTCAGCAAATAGAAGATTTTGCAAAGGAAATGTTGTTCTCAGTGATGAGTGGTGATGCATCTGAAGCTACTGATGCTGAACGGTCCATTGCTGATTCACAAAAGGGACCTGATATTGAAAATCTTCCGAATGAACCATCTTCATTGAGCGGCAGCACTAAGGATGTATCCTCAGATAATCGCCAATCATCCACATCCGAAGATGCCTCGCCAGTTTCAGTTTCTGAGGCCCAGAGGTGCATGTCATTGTATTTTGCTTTGTGCACAAAGAAACACTCTCTCTTTCGCCAAATATTTGTCATCTATAGAAGCACATCAAAGGCAGTGAAGCAGGCAGTTCATCGTCAAATACCTATACTAGTGCGTACAATGGGCTCATCTTCAGACCTTCGTGAAATTATTTCGGATCCCCCAAATGGAAGTGAAAATCTCCTAATGCAGGTGTTACATACACTTACAGATGGCATAATCCCTTCTAAGGATTTAATATTTACTGTGAAAAGGTTACATGATTCAAAACTCAAGGATGCAGAATTTCTTATTCCGATTTTACCATACTTACCGAAAGATGAGGTAATGCCGGTTTTTCCACACATTGTGAATCTTCCTTTGGAAAAATTCCAAGAAGCACTTGGTCGCCTATTGCAGGGATCATCACAATCTGGTCCGGTGCTTACTCCAGCTGAAGTTTTAATTGCTATTCATGGAATTGATCCTGAAAGAGACGGAATTCCCTTAAAAAAGGTAACAGATGCATGCAATGCATGCTTTGAGCAGCGGCAAAATTTTACTCAAGAAGTTCTTGCCAAAGTTTTGAACCAACTTGTTGAGCAGATTCCTCTTCCTTTACTGTTCATGCGTACAGTATTACAAGCAATTGGTGCTTTTCCAACTCTGGTAGACTTTATAATGGGGATTCTTTCTCGCCTTGTGAGGAAGCAGATATGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGTGTGCAATTGACGAAACCTCAATCATTTGGTGTTTTGCTTCAGCTACCTCCAGCACAATTGGAAAATGCATTAAATAGAATTGCAGCACTAAAGGCACCATTGATTGCACACGCTAGCCAGCCGGATGTACAATCTTCACTTCCCAGATCTGTGCTGGTCGTTCTGGGAATTGCTTCCGACACACAGGTTTCAAGTCAGGCACAAACTAGTCAAACACAGACAGGTGAGACAAGCAACTCAGACAAGGAGACAGTGACAGAAAAATCTAAAGAATCATCTACAGCGAGCTAA 2709 0.4112 MFGALVAQGEKAVVSLEILISSISADLLAEVVMANMRHLPPKYPNAEGDDEQLHDISIFGSDDKAKYPPSFIAGVMSLSSTFPPVASLLDAHQSVSNDVVKSHGEEEISLTGIDSTVVHSGMNLSTENVPSPTDYPSSDACIPGVENGSTTMPSDIHDVGNFESGIPGLDSFGRSDAISETLAASSLASTEIQLEEASQEQVTSLDQRSPLNMVPSISTDRSEELSPKAVVTDVNSLVSSTATSVVFPSHLILPKMIAPVVDLADEQKDHLQKLCFMRIIDAYKQIAVAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYTSHEGHELTLRVLYRLFGEAEEESDFFSSTTAASVYETFLLAVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKVDKESHSLNADRVTQGLSAVWSLILLRPPIRDTCLKIALQSAVHHLEEVRMKAIRLVANKLYPLSSISQQIEDFAKEMLFSVMSGDASEATDAERSIADSQKGPDIENLPNEPSSLSGSTKDVSSDNRQSSTSEDASPVSVSEAQRCMSLYFALCTKKHSLFRQIFVIYRSTSKAVKQAVHRQIPILVRTMGSSSDLREIISDPPNGSENLLMQVLHTLTDGIIPSKDLIFTVKRLHDSKLKDAEFLIPILPYLPKDEVMPVFPHIVNLPLEKFQEALGRLLQGSSQSGPVLTPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQNFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILSRLVRKQIWKYPKLWVGFLKCVQLTKPQSFGVLLQLPPAQLENALNRIAALKAPLIAHASQPDVQSSLPRSVLVVLGIASDTQVSSQAQTSQTQTGETSNSDKETVTEKSKESSTAS. 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10780 902 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 890 - -
Seca4g10780 902 MobiDBLite consensus disorder prediction 518 550 - -
Seca4g10780 902 MobiDBLite consensus disorder prediction 502 550 - -
Seca4g10780 902 Pfam Symplekin tight junction protein C terminal 654 832 IPR022075 -
Seca4g10780 902 MobiDBLite consensus disorder prediction 198 222 - -
Seca4g10780 902 MobiDBLite consensus disorder prediction 868 902 - -
Seca4g10780 902 MobiDBLite consensus disorder prediction 868 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10780 Seca-Chr4 244959430 244976902 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10780 K06100 - gmx:100779360 1491.09