Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10762 ATGTCATCTTTCGGCAGCTCCAGCCAGCCGTTTGACGACGACAGCGGCTTCGTCGGCTACGATCCCCGGCTCCAGTCACAGCGCTTCGATTCGTTCTCCAACTTCGACGCCGACTCGGTCAAGGACTCTGCCGGTGACTCCTCCCCAATCTTCGGCAGCGGGGCGTACGCCACCGGAGATGAAGTGTTCTCCTCTCAGGCGGTGCCGGAGACTCCGTCTCCTCCTTCGATCCACTCCGCCACCGGGGGATTCTCCGCGTTCTCGCCAGAGCAGAACGGGGAGGGCGTCGGCGGAGGTTTCAGCGCTTCTGATATGGCGCCGGAGGAGGGGTTTGCCCTGAGGGAGTGGCGAAGGCAGAACACGATTCGATTGGAGGAGAAGGAGAAGAAGGAAAAGGAGATGCGGTTGCAGATCATAGAGGAAGCAGATGAGTACAAAATTGAGTTTTACAGGAAGCGTGAGGTTAATGTTGAGAACACCAAGGCTTCTAATAGGGAAAGAGAGAAGGTACTCTCAATCTCAATTGCTCATCTTCTCTGTTTTTCCCCCTTCTTCTTCAAACACTCATTTAGATTGAAATTTCACTTTTCTTTATTCTCCTCTGAGAATTTGAATGTCAATCTGTATGGTGCTGCTAGATCATTTTTTATTTTTTAA 657 0.5175 MSSFGSSSQPFDDDSGFVGYDPRLQSQRFDSFSNFDADSVKDSAGDSSPIFGSGAYATGDEVFSSQAVPETPSPPSIHSATGGFSAFSPEQNGEGVGGGFSASDMAPEEGFALREWRRQNTIRLEEKEKKEKEMRLQIIEEADEYKIEFYRKREVNVENTKASNREREKVLSISIAHLLCFSPFFFKHSFRLKFHFSLFSSENLNVNLYGAARSFFIF. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10762 218 PANTHER CLATHRIN LIGHT CHAIN 4 170 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Seca4g10762 218 MobiDBLite consensus disorder prediction 35 101 - -
Seca4g10762 218 MobiDBLite consensus disorder prediction 64 88 - -
Seca4g10762 218 Coils Coil 122 144 - -
Seca4g10762 218 MobiDBLite consensus disorder prediction 1 22 - -
Seca4g10762 218 Pfam Clathrin light chain 80 169 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10762 Seca-Chr4 244737141 244737912 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10762 - - aip:107625735 265.388