Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10760 ATGGCATCACTACTTCTAGCATCACCTCCCCCACTTTCCATTCAATCTCACAGTTCTTCCTCTCACCTTTCCTTTTCTCACTCGCAATCTCTCTGCGCACCGCTCTCCACTTCATTCGCCTCGCTTTCAGCCTCTGCAACCTCATCTCCTTCAACAATCCCTTCTGTGTACTGTGGCAGAGGCGACAGGAAAACTGAAAGGGGAAAGCGCTTCAACCATTCATTTGGGAATGCAAGGCCAAAAGACAAGAAGAAAGGTAGAGGACCACCAAGGCTTTATGCTCCACCGGCACCTTCCAAGAAAGACAAGTTTGAAGACAATGAGGTGGTGAAGATTGAAATTGATGAGTCCCTCTTCTCTGGCTGA 366 0.4836 MASLLLASPPPLSIQSHSSSSHLSFSHSQSLCAPLSTSFASLSASATSSPSTIPSVYCGRGDRKTERGKRFNHSFGNARPKDKKKGRGPPRLYAPPAPSKKDKFEDNEVVKIEIDESLFSG. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10760 121 MobiDBLite consensus disorder prediction 60 89 - -
Seca4g10760 121 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 17 112 IPR044695 -
Seca4g10760 121 MobiDBLite consensus disorder prediction 44 104 - -
Seca4g10760 121 MobiDBLite consensus disorder prediction 9 24 - -
Seca4g10760 121 NCBIfam 30S ribosomal protein THX 59 83 IPR030826 GO:0005840
Seca4g10760 121 Pfam Ribosomal protein S31e 1 102 IPR030826 GO:0005840
Seca4g10760 121 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10760 Seca-Chr4 244725471 244727374 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10760 K19033 - gmx:100805197 155.992