Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10744 ATGGAAAACGCGCCGGTGCCTATGCTGATGGAATACCTCACAAGTTCATGGAAGAAGGAGAATCTTCGAAATGCTGCTATTTTAACGAATCTGCAAGATTTCCTATCGTGTTACTTTGAGGTTGTTCTATCTCTAGTCTCAGAAGCCTTCACAGGTTGTTTCACCATGCAAAACCAAAAATTCCCATTCTTATTGCAGGGTTTAATGCTGCTGTGGATATCTGCTACATCAATTTCAAATGAATTTCATATGGTTTATGTAGCAATAGTGGTACTTGCATTAGGCAAAGCTGGTCAAACGCTTTTACAAGATTTTCTTGAAGATCAATTAGAAGAGAAAGTGAAAGCAAAAGCGAAAAAGGAAAGCAGAGCAGAACGTGAAAATAAAGAGCAGGACCACATTGATAAATTTCATTTTAATGTGTGGTGGCGCCCTGCGTGTTTCGCTGGAAATGTCTTAACAGTTTGTATGTCTTACGTTTTTTATAACCCAAGTGACATCTTTAGATTTGCGTCACTCCTCATGGGAGCAACTGGTCTGATCTTCTTCTTTGGTCGTGCGCGCTTTAGCCCAAGTAGCTACAAAAACTTGCCTGCCGAACCCAATCTAGGCAAGATCAATAGAATCTTCAGAGTAGCTCTCAGCAAAAGGAAACTCGGATATCCAACCTCAGAGAGTTCCTATTACTGGAAGGATGATAAGCAGAACCATTTTTATAAGCATGGTCAAGAACTAAGGTTATTGCCTCAAGTTCCAGAACCATTGGGGTGGTTGGACAAAGCAGCTATAATTGAAGTTGAAGAGCAACAATATTCTGATCTCAGTCCACAGAGGCAAGAAAGGAAAAAGAAGGTTTGCACGGTTAAGGAAGTGAGGGAAGTGAAGAGCATCATTCCATTGATCTGCCTGGGGTTTACCTTCTTTGCTTACAGCTTAGTTGTGGCCACTGCCAACACTTTTTTTGTTGAACAAACAAGCAACTTGACACCTGCTATGGTTAAAAACGGTAGTGATATCCCTCTTCTCTTTGTAGCCAAGGCCATCATGGGTGATGTTTCATCGTTCCTCTGCTGGCTTATCAGCTTTGCCAAACTTCCTAAGAATTGGATTGTCAATTCTAGATTCAAAAGAATAGTAGCCATGAATATAAGGATTGGCATTGGTATAGTTTGTGCTCTAATTTGCTGCATCATAGCATGGCAAGTGGAGCATCAAAGATTATCTTTGATAAGAAAGGAGGGGATACTCGAAAACCCAGCAATGGTCTTGGTCCCACAATTTTTAATGTTAGGAATAACGGAAGGACTTGTTGAAGGAGGGTTGGCGAATTTATTCAATGACCTCGCATCAAAATCAATGCAGAGTTTTGAGAACTCTTATAGTCAAGTGGTGGTGGGTACAGGGAAATTCTTCACCATTCCATTTGTGTTAATTTTCTGGGGCTGGATTAAGGAAACTGCTAACACTAGCCATTTGGACAGGTATTATCTGATGTTAGCGATATTGAACTTTGTGTTCCTTCTCGCTTTTGTATTTGTCTCCTTCTCCCTCAGAGAAGCATATATACAAGAAGAGTGCCCCAAGGATGAACAAATTGAGATGCAGCCAAGATCAGAACATGCTCCTCAACAAGACTCGGAGGAAACAAATGCGACACAAGAAAATTTGGCAATGCAAGTGGTGGTCGCAGGGGATTCAAACTGGAACAACAATGAATACATCTTGTAA 1728 0.4091 MENAPVPMLMEYLTSSWKKENLRNAAILTNLQDFLSCYFEVVLSLVSEAFTGCFTMQNQKFPFLLQGLMLLWISATSISNEFHMVYVAIVVLALGKAGQTLLQDFLEDQLEEKVKAKAKKESRAERENKEQDHIDKFHFNVWWRPACFAGNVLTVCMSYVFYNPSDIFRFASLLMGATGLIFFFGRARFSPSSYKNLPAEPNLGKINRIFRVALSKRKLGYPTSESSYYWKDDKQNHFYKHGQELRLLPQVPEPLGWLDKAAIIEVEEQQYSDLSPQRQERKKKVCTVKEVREVKSIIPLICLGFTFFAYSLVVATANTFFVEQTSNLTPAMVKNGSDIPLLFVAKAIMGDVSSFLCWLISFAKLPKNWIVNSRFKRIVAMNIRIGIGIVCALICCIIAWQVEHQRLSLIRKEGILENPAMVLVPQFLMLGITEGLVEGGLANLFNDLASKSMQSFENSYSQVVVGTGKFFTIPFVLIFWGWIKETANTSHLDRYYLMLAILNFVFLLAFVFVSFSLREAYIQEECPKDEQIEMQPRSEHAPQQDSEETNATQENLAMQVVVAGDSNWNNNEYIL. 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10744 575 Pfam POT family 168 471 IPR000109 GO:0016020|GO:0022857|GO:0055085
Seca4g10744 575 Gene3D MFS general substrate transporter like domains 6 523 IPR036259 -
Seca4g10744 575 SUPERFAMILY MFS general substrate transporter 142 519 IPR036259 -
Seca4g10744 575 MobiDBLite consensus disorder prediction 528 544 - -
Seca4g10744 575 Coils Coil 107 130 - -
Seca4g10744 575 MobiDBLite consensus disorder prediction 528 550 - -
Seca4g10744 575 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 9 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10744 Seca-Chr4 244444607 244446424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10744 35 533 Organic Solute Cotransporters AT3G54450 23.855 3.53e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10744 K26562 - pvu:PHAVU_010G004400g 332.798