Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10575 ATGGCCGTTCGAGCAGTGAACACCTGCTCCCTCTTCCGCCCTTCCTCTCCTCCTCTCTCCTCTGCTGTCCGCTTTTTCTCCCGCTACCAGATTTCTCGCTGCCGCCGTTGCCCCGCCTTTTGCTCTCACCCTCCCTTATCCACCGGTTATGGCCGCCAAACTCAAAGCCGCACCATCCAGAGCCTCTTCGAGAGCGTCATGGAAGAGCTCCAAGCCATGCGCAAACGCCGCAAGAAAGTCGTTTCCGCTACCGCAGCTTCTTCCAAGTTTAACAGCACGGGATTGTTGAATGAAGAGCTTCTTGAAGATAGACTTGTGTCCCGTTCATTGCAAAAGGGGTTGCTTTTGGAATTCAAGAAGGATTCTGATAGAGTATTACTAGCAGTTGCTCAGAGACCTGATGGCAAGAAGAACTGGATGGTTTCTGATCAGAATGGTGTCACTTCTTCCATCAAACCACAGCAAGTGACATATATTGTTCCCGGTATCGACAATTTTGACCCAGCAGATATCTCAGATTTTATTCAGAAAGCACAGGACAACATGGACCCATCACTACTTGAATTTGCTTGGGTTGAACTCTTGGAAAAGAATAGGTCTGTGACAGTTGAAGAGTTGGCTGAGATTATTTTTGGTAGTACTGAGCCTCTTGAGAGCTATTCTTCTCATCTCTTACTATCAAAAGATGAAGTATACTTTACTGTGCTCGAGACCAAAGGATCCCGTTCCATTTATGGACCTCGATCAAGTGAGCAGGTAGATGTGTTACTTTCAATTTCAGGGCAGGTTGAGGAGCTTGTTCGTAGGAAGCTTGCAAAGGAGGCTGCTGACAAAGAACTTCAGGAGTTTATCAAACTGCTGTCCTCTGCAAAATCAATGCCTTCACAAGATAAACCTACCAAAAAATCATGGATGAATGAGGAGAAAATTTGGAGCAGAATTGAGTCCCTTGAAGCATATGCTATTGATGCATGTAAAAATGATGAACAAAGGAAAACAGCTGGGATGATACTTAAGGAAATGGGTCTGGCAAAAACAGCATCTTCAGCTGCGAATCTCTTGGTAAATATTGGGTATTTTCCTGTACATGTCAATTTTGATCTATTGAAGTTGGGAATTCCCACTGATCACTCTGAAGAGATTATATCAGCTGCTCAAAGCCTTTTATCAGACTCATCTGATCCAGATGAAATCAATAGGAAGAATCTTACCAGTTTAAAGGTCTATGCTATTGATGTTGATGAAGCTGATGAGCTTGATGATGCTTTGAGTGCAACAAAGTTGCAAGATGGTCGGATTAAAATTTGGATACATGTTGCAGACCCAACTAGATATGTTCAACCCGGAAGTATTGTGGATAGGGAGGCTATGAGAAGAGGAACTTCTGTTTTCTTGCCCACTGCTACATATTCTATGTTTCCAGAAAACCTTGCCATGGGGGCTATGAGTTTGAGACAAGGAGAGCTTTGTAATGCTGTTACTGTATCAGTTGTGCTGCATGATGATGGCAGCATTGCAGAATGTTCAGTGTTCAACTCGGTGATTAAACCAACATACATGCTGACATATGAGAGCGCATCTGAGCTACTCCATTTGAACCTTGAGGAGGAGGCTGACCTCAGAATTTTGTCTGAGGCTGCAAACCTTCGTTTAAATTGGCGACGCCGGCAGGGTGCAGTTGAGACAGCAACATTAGAAACTCGCATTAAAGTGTCTAATCCAGAGGATCCAGAGCCATCAATAAACCTTTATGTGGAAAACCAGGCAGACCCTGCAATGCGATTAGTCTCTGAGATGATGATACTCTGTGGTGAAGCTATGGCCACATTTGGATCTCAGAATGAAATTCCTTTACCCTATAGAGGACAACCCCAATCAGATATAAATCTTTCTGAATTTGCCCACCTTCCAGAAGGGCCTGTTAGGAGCTTTGCCCTGGTCAAAGTAATGCGTGCTGCTGAAATTGATTTCAGGAAGCCAGCACGCCATGGGGTTTTGGGTCTTCCTGGTTATGTTCAATTTACCTCTCCAATCCGTAGATATTTGGATCTTCTTGCTCATTATCAGGTAAAGGCATTTCTTAGAGGTGAGCCTCCACCCTTTTCAGCTGGTATGCTTGAAGGGATAGCAGCTGCTGTAAATGAGAAAGTTAGAACTGTGAGGAAGCTCTGCAACAGTAGTCTTCGATACTGGATATTAGAATATTTACGAAGACAGCCGAAAGAGAGAAGATATCGAGCATTGGTCCTTAGATTTTTGAAAGATCGAATTGCAGCTTTGTTGTTGGTTGAGGTTGGATTTCAAGCTTCTGCCTGGGTCTCTGTTGGAACTCAGATAGGGGATGAAGTAATGGTTAAGGTGGAAGAAGCACATCCACGTGATGACATTATTTTTCTGAAGGAGGTTGTTAAAGGTTGA 2418 0.4384 MAVRAVNTCSLFRPSSPPLSSAVRFFSRYQISRCRRCPAFCSHPPLSTGYGRQTQSRTIQSLFESVMEELQAMRKRRKKVVSATAASSKFNSTGLLNEELLEDRLVSRSLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVSDQNGVTSSIKPQQVTYIVPGIDNFDPADISDFIQKAQDNMDPSLLEFAWVELLEKNRSVTVEELAEIIFGSTEPLESYSSHLLLSKDEVYFTVLETKGSRSIYGPRSSEQVDVLLSISGQVEELVRRKLAKEAADKELQEFIKLLSSAKSMPSQDKPTKKSWMNEEKIWSRIESLEAYAIDACKNDEQRKTAGMILKEMGLAKTASSAANLLVNIGYFPVHVNFDLLKLGIPTDHSEEIISAAQSLLSDSSDPDEINRKNLTSLKVYAIDVDEADELDDALSATKLQDGRIKIWIHVADPTRYVQPGSIVDREAMRRGTSVFLPTATYSMFPENLAMGAMSLRQGELCNAVTVSVVLHDDGSIAECSVFNSVIKPTYMLTYESASELLHLNLEEEADLRILSEAANLRLNWRRRQGAVETATLETRIKVSNPEDPEPSINLYVENQADPAMRLVSEMMILCGEAMATFGSQNEIPLPYRGQPQSDINLSEFAHLPEGPVRSFALVKVMRAAEIDFRKPARHGVLGLPGYVQFTSPIRRYLDLLAHYQVKAFLRGEPPPFSAGMLEGIAAAVNEKVRTVRKLCNSSLRYWILEYLRRQPKERRYRALVLRFLKDRIAALLLVEVGFQASAWVSVGTQIGDEVMVKVEEAHPRDDIIFLKEVVKG. 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10575 805 SUPERFAMILY Nucleic acid-binding proteins 352 739 IPR012340 -
Seca4g10575 805 PANTHER RIBONUCLEASE 74 802 - -
Seca4g10575 805 Pfam RNB domain 400 695 IPR001900 GO:0003723|GO:0004540
Seca4g10575 805 SMART RNB_2 400 696 IPR001900 GO:0003723|GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10575 Seca-Chr4 241921120 241936787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10575 K01147 - gmx:100803243 1290.02