Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10544 ATGGCGGCCTTGCCGGGAAATCGCCGGGACTCTTCTTCCAGTTCATCCAGTTCGAGCGATCTCTCGGTCAGAGTGGAGCGCGAACTTGGTGCCGGAAACGGAAGTACTGGCAAGGAAATGGAGGTTAGTGCAGATGCTGCTGCCAATGGAGGTTCCCTTGATAACGGTAGCAGTAGCTCTTCAGCCTCAGGCATTCCTGGCAGGGGGTTGTCCAAAGTGACCACACTGCCAGTAGACTTATCACATGGAGATAAATTGGAGTCAAGTTCAAGTAAATTCAAGTTGGAAAGGTCAAAAACAGAGCGGCAGAGACATCTAAGGCCTGAAGATGCAGCACAAATTTTTGATGATAAAATTCCTGTCCAGGAGAAGCTTAAATTGTTAAACAGAATAGCTACTGTAAAAGATGATGGTACTGTAGAATTTGAAGTTCCAGGAGATGTTGAAGCTGAAGCTCTTGGTGCTCGATCCAAACATGTAAATAATGTTGTTGATGATTCACTTGATGCAACAGACCTTCACTACATCCCACCAATGAATATAGTGATGCTTATTGTTGGTACACGAGGAGATGTACAGCCATTTATTGCAATAGGAAAGCGCTTGCAGGACTATGGCCATCGTGTTAGATTAGCAACTCATTCAAATTTTAAGGAGTTTGTTTTGACAGCTGGGTTGGAGTTTTATCCGTTAGGCGGTGATCCAAAAGTCCTTGCTGGTTATATGGTTAAAAATAAGGGCTTTCTGCCATCGGGACCTTCAGAGATACCTATTCAGCGAAATCAAATGAAAGAAATTATTAACTCTCTGCTTCCAGCTTGTAAAGAACCTGATATTGATTCTGGTGTCCCCTTTAAAGCAGATGCAATCATTGCCAATCCCCCAGCATATGGGCATACCCATGTGGCAGAGGCACTTAAAGTTCCAATTCACATTTTTTTCACAATGCCATGGACGCCAACTACTGAATTTCCACATCCTTTGTCTCGTGTAAAGCAACAGGCTGGTTATAGGCTTTCATATCAAATAGTTGACTCGTTAATTTGGCTTGGAATACGAGACATGATCAATGATCTTAGGAAGAAAAAGTTGAATCTTCGACCAGTCACATATTTAAGTGGCTCACAAGGCTCCGAAACTGATATTCCACATGCATATATATGGAGTCCTCATCTTGTTCCTAAACCAAAAGATTGGGGACCGAAAATCGATGTAGTAGGGTTTTGCTTTCTTGATCTTGCATCAAACTATGAACCTCCTGAGTCTCTTGTGAAATGGCTTGAAGATGGTGACAAACCTATTTACATTGGATTTGGTAGCCTGGTGAGTGTATTGATTTCCATCATACCTTTATCTTAA 1359 0.4238 MAALPGNRRDSSSSSSSSSDLSVRVERELGAGNGSTGKEMEVSADAAANGGSLDNGSSSSSASGIPGRGLSKVTTLPVDLSHGDKLESSSSKFKLERSKTERQRHLRPEDAAQIFDDKIPVQEKLKLLNRIATVKDDGTVEFEVPGDVEAEALGARSKHVNNVVDDSLDATDLHYIPPMNIVMLIVGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQMKEIINSLLPACKEPDIDSGVPFKADAIIANPPAYGHTHVAEALKVPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLNLRPVTYLSGSQGSETDIPHAYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPESLVKWLEDGDKPIYIGFGSLVSVLISIIPLS. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10544 452 MobiDBLite consensus disorder prediction 50 68 - -
Seca4g10544 452 MobiDBLite consensus disorder prediction 85 106 - -
Seca4g10544 452 MobiDBLite consensus disorder prediction 1 106 - -
Seca4g10544 452 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 52 443 - -
Seca4g10544 452 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 181 413 - -
Seca4g10544 452 MobiDBLite consensus disorder prediction 7 23 - -
Seca4g10544 452 CDD GT1_Gtf-like 179 445 IPR002213 GO:0008194
Seca4g10544 452 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 179 445 - -
Seca4g10544 452 Pfam Glycosyltransferase family 28 N-terminal domain 181 324 IPR004276 GO:0005975|GO:0016758|GO:0030259
Seca4g10544 452 Gene3D Glycogen Phosphorylase B; 179 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10544 Seca-Chr4 241469926 241482587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10544 94 441 Glycosyltransferase AT3G07020 81.586 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10544 K05841 - gmx:100780970 727.243