Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10496 ATGGGTTTTGACTGTTTGTTAATGGCTTGTGAAGATCGCAAAGTTTCTGCTCAAGATCTTCGTTTCAAACTTCAAAAGAAAGGTCTTCAACCTGCAGCTCAGACTGGAAAGAGTTCTGTTCCAAACACGCGGGATCTCCGTGAAAAGCTATCAGGGACAATGACTTCACAACCTAAAAACTCTGACCCACCAAAGTCCAAAGTTGTTGTTAAACCAAGCAGTAAAAGTATTGGTGTTGAGGCTCCTGCAGTGCAGGTCAAAAGACCAGCTAACCCAGCTCCTAAACCGTTGACACGGAAGGCTGATACATCAGTGGATGAATTTTTGCAGTCCTTGGGTCTCGAAAAGTATCTCATAACTTTCCAGGCTGAAGAAGTTGATATGACAGCTCTCAATCATATGACTGATGAGGATCTCAAGGCTATGGGTATACCAATGGGGCCAAGAAAGAAGATACTTTTAGCGTTGGAGTCAAAAGCTTGA 483 0.4327 MGFDCLLMACEDRKVSAQDLRFKLQKKGLQPAAQTGKSSVPNTRDLREKLSGTMTSQPKNSDPPKSKVVVKPSSKSIGVEAPAVQVKRPANPAPKPLTRKADTSVDEFLQSLGLEKYLITFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLALESKA. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10496 160 MobiDBLite consensus disorder prediction 31 63 - -
Seca4g10496 160 CDD SAM_superfamily 104 157 - -
Seca4g10496 160 SMART SAM_4 97 160 IPR001660 GO:0005515
Seca4g10496 160 FunFam Sterile alpha motif domain-containing protein 102 160 - -
Seca4g10496 160 ProSiteProfiles SAM domain profile. 100 154 IPR001660 GO:0005515
Seca4g10496 160 Gene3D - 102 160 IPR013761 -
Seca4g10496 160 PANTHER SCP160 72 156 - -
Seca4g10496 160 SUPERFAMILY SAM/Pointed domain 101 157 IPR013761 -
Seca4g10496 160 MobiDBLite consensus disorder prediction 25 101 - -
Seca4g10496 160 Pfam SAM domain (Sterile alpha motif) 102 157 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10496 Seca-Chr4 240850796 240856448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10496 12 159 Glycosyltransferase AT3G07170 56.376 8.07e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10496 - - gmx:100784706 215.312