Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10474 ATGGCACAACGTTCTCATGTACCAAAATTTGGCAATTGGGAAAGTGATGACAATGTTCCTTATACAGCATATTTTGACAAGGCCAGGAAAGGTCGAACTGGCACAAAGATGATAAACCCAAATGACCCTGAGGAGAATGCAGATTTAGTTCTTGATAATTCATCATCTGATCACCTACCTCCATCCAAATCCAACCCCAGAGCTGATTCAGAGTATCCATCTGGAAAGGGATCAGTGCAACCAACAAATGAGTCACATAAGAGCATGGAAGATGGTGATCCTAAGCATTTTATTGACTCTCCAGCTCGTCAGGACAATGTAGGCAGGAGTGGCAGTGATTCTACACCTCGCCATGGAGGCCCAGGAGTAGGTTCTGCAGATAACCGCAGAAGACCTTCAAGACAAAGTACTGGGTCTGAATACAGCATTGAACAATCACCCCTTCATCGTCAGGCTAGAGCCCCAGGCAGAGATAGTCCCTCATGGGAGGGAAAGAATTCCTATGACAGCAGCCATGGTACACCAGGAAGATCCCGGTTAAGACCAGCCAACCGAGGGGATGAAACTCCTGATAAAGGTGCAGCTGTTCCAAAGTTTGGTGAGTGGGATGTGAGTAACCCTGCATCAGCTGATGGCTATACTCACATTTTCAACAAAGTGAGGGAAGAGAGACAGGGTGGACCTGGACATGCTCCAGGCACACCTACTGAGAGACCACATGTTATCCGAAACCAACCTTCTGATGACAAAGTCCAGTGTTGCTGCTTTTGGTTGGGCAAAAAATGA 786 0.4695 MAQRSHVPKFGNWESDDNVPYTAYFDKARKGRTGTKMINPNDPEENADLVLDNSSSDHLPPSKSNPRADSEYPSGKGSVQPTNESHKSMEDGDPKHFIDSPARQDNVGRSGSDSTPRHGGPGVGSADNRRRPSRQSTGSEYSIEQSPLHRQARAPGRDSPSWEGKNSYDSSHGTPGRSRLRPANRGDETPDKGAAVPKFGEWDVSNPASADGYTHIFNKVREERQGGPGHAPGTPTERPHVIRNQPSDDKVQCCCFWLGKK. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10474 261 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 254 IPR040387 -
Seca4g10474 261 MobiDBLite consensus disorder prediction 27 245 - -
Seca4g10474 261 MobiDBLite consensus disorder prediction 129 146 - -
Seca4g10474 261 MobiDBLite consensus disorder prediction 1 20 - -
Seca4g10474 261 MobiDBLite consensus disorder prediction 86 102 - -
Seca4g10474 261 MobiDBLite consensus disorder prediction 48 85 - -
Seca4g10474 261 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 190 225 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10474 Seca-Chr4 240463010 240470033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10474 K13456 - gmx:100499218 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10474 4 240463010 240470033 Seca4g10474 4 240463010 240470033 PCT