Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10454 ATGGTGGAAGTTGAAGAGGTAGAGCTGGATTTAGGGTTGTCCATAGGTGGAACTTTCAGGAAACCCGTGGAGAAGCCCAAACCCGACGTGTTTCATTCGGATCCGGATGGCATGCAGCGAGTGGATCCACATGCGAAGCGCGAGATTCAGGCGCTGAGGAGAATGGAGGCGAAGAAGAAGCGAGAGCAGAAGAGGGGAACCAGCAGGGACCGGGTCGGAGAGTCCGAACCCGAATACCAACGGCCATTTAAAAGAGAGAAGACGGATTTTATGGACGGCGTTATGAGTGGCACAACCGTTTCCTGGACGGCGCCGTTTCGCGTGCAACAACCGCACCCGTACGCGACTGTGCAGTACGTGCCGTTAAATAATGGCTTTGCGTTACCGTGTTGGGTCACCAGCGAGAAGAATGTGGGTGGATTAGACGGCGTTAACGGTGGAGACGGAAAAGCTAAGTCCAATGGGTCTTCTAGGTGCAGTTCATCTGCAGTTTCGGATTACCAAAGTTCTTCTCGTGAAGATGGAGGAAGCACAGACAGCCGTAGCCATTCAGCCAATTCTTTGGCAGAACCAACACAGTTGAGCAGTTCCAAGGAAATTAACATAAGAAGCCAACCTGAAGAAAGTGCTTCATCTCATGGATCCAAACAAGGCAATAGTGAACAAGAGAGAAAGCACATTGAGAAGGAAACTCAGCCAAACAACACGCAAGCAGAGGCAATGAAAGTCAAGGAAGAAGCTGCAACAACAAACAGCAAAGCACTTCCAAGGCCAATTAACAAGCCTTTGTGTAATGCCAATACAAGCAATTGCCCCTTGAAGCCACCAAAGCCTCTGTCTCAGACCTCTTCCCTTCCTCAAATGCCGTATGTATCAACAAAAGGTAACGGACCAAATGGGAAAACGGTTAATGGGTTTCTATACAGATATAACAAATCTGAGGTTAGCATTGTTTGTGTCTGCCATGGAAGCACATTTTCACCTGCTGAGTTTGTGCAGCATGCAGGGGGCACAGATATTTCACACCCTTTACGACACATTACTGTAATTCCTTCTGCCTTTGGGTGA 1068 0.486 MVEVEEVELDLGLSIGGTFRKPVEKPKPDVFHSDPDGMQRVDPHAKREIQALRRMEAKKKREQKRGTSRDRVGESEPEYQRPFKREKTDFMDGVMSGTTVSWTAPFRVQQPHPYATVQYVPLNNGFALPCWVTSEKNVGGLDGVNGGDGKAKSNGSSRCSSSAVSDYQSSSREDGGSTDSRSHSANSLAEPTQLSSSKEINIRSQPEESASSHGSKQGNSEQERKHIEKETQPNNTQAEAMKVKEEAATTNSKALPRPINKPLCNANTSNCPLKPPKPLSQTSSLPQMPYVSTKGNGPNGKTVNGFLYRYNKSEVSIVCVCHGSTFSPAEFVQHAGGTDISHPLRHITVIPSAFG. 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10454 355 MobiDBLite consensus disorder prediction 54 88 - -
Seca4g10454 355 MobiDBLite consensus disorder prediction 17 42 - -
Seca4g10454 355 MobiDBLite consensus disorder prediction 150 217 - -
Seca4g10454 355 MobiDBLite consensus disorder prediction 218 232 - -
Seca4g10454 355 Coils Coil 45 65 - -
Seca4g10454 355 MobiDBLite consensus disorder prediction 262 296 - -
Seca4g10454 355 PANTHER AFP HOMOLOG 2 4 353 IPR031307 GO:0007165
Seca4g10454 355 Pfam Tify domain binding domain 315 348 IPR032308 -
Seca4g10454 355 MobiDBLite consensus disorder prediction 147 296 - -
Seca4g10454 355 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10454 Seca-Chr4 240248350 240250365 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10454 - - lja:Lj3g3v0719960.1 436.417