Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10415 ATGTCTCGTGCACCCAACTATGAGTTCCAGGAATGGTGGAACAAGCAGAGAGAAAAGAACAATCTCGACCTTTTGGAAGACAAGGCCGAGCAAGCCGACGCTCCTTTCATCGCCGTCGACGTCGACGGCGGAAGCGGCGTCCGGTCGGATCCGTCGGTGGAGAAAGAGCGTACACGGAGCGCGCGGCAGCTCCGGTGGGTGTGTTTGCTGAAATTCCAGCAAATCGCGGCGACGGTGGCAGTGATATCCAACAATTTCTTCTTCTTCCTCCGCACCGCGAACCGCCGGATCGCGTCGCAGGACTTGCCGGCTGATTCGGCGCATTCGCGTTTGTACCGTGCGATTAGGGTGTTCCTGATCGTTGTCATTGCCTTGTTAGGGTTTGAGCTTGTTGCTTACTTCAAAGGATGGCATTTCCGGCCGCCGGCGGTGGGGTCCGCCGATGTGATGGGAATGGTGGCCGTGGTCTATGCGTGGTGGCTTGAGATTCGGGTGACTTACTTGGCACCGCCGCTGCAGAGTTTGACCAACATGTGTATTGTGCTGTTCATTGTGCAGTCGGTTGATCGGATTGTTTTGATCTTGGGATGTTTCTGGATCAAGTTTAAGGGAATCAAGCCTGTGGCTGCTGTGGATTATGAGGGAAGTGTTGAGAATGTGGAAGATTATCCCATGGTGTTGATTCAGATTCCCATGTGCAATGAGAGGGAGGTTTACCAGCAATCCATTGCAGCAGTTTGTATCCTGGATTGGCCAAAGGAGAGAATGCTTGTACAGGTTCTTGATGATTCTGATGAAGTAGATACCCAACAGCTCATCAAGGCAGAAGTACATAAATGGCAGCAAAGGGGTGTTCGGATAATATATAGACACAGGCTTATACGTACAGGCTACAAGGCAGGGAATCTTAAATCTGCGATGGGTTGTGATTATGTTAAGGATTATGAGTTTGTGGCAATATTTGATGCTGATTTTCAGCCAACACCAGATTTCTTAAAGAAGACAATACCTTATTTCAAGGGAAGGGATGATTTGGCATTAGTCCAGACAAGATGGGCATTTGTAAACAAGGATGAGAACTTGCTTACCAGATTGCAGAACATTAATTTATCTTTCCACTTTGAGGTTGAACAGCAGGTGAATGGTGTCTTCATCAACTTCTTTGGTTTCAATGGAACTGCTGGTGTCTGGAGAATAAAGGCCCTTGAGGAGAGTGGTGGCTGGTTGGAGCGAACAACTGTAGAGGACATGGATATTGCTGTTCGTGCTCATCTCTGCGGATGGAAGTTTATATTTCTCAATGATGTTAAGTGCCTTTGTGAACTTCCGGAGACATATGAGGCATATAAGAAACAACAACATCGCTGGCATTCTGGTCCAATGCAATTGTTCCGTTTGTGTTTTGTTGATGTACTTCGTTCAAAGGTTAGTTGGGGAAAGAAAGCCAACTTGATATTTCTTTTCTTCCTCCTGAGGAAGCTTATCTTGCCATTTTATTCATTCACCCTCTTCTGCATCATTCTTCCATTGACCATGTTCCTTCCAGAGGCTGAGCTCCCAGCCTGGGTTGTTTGTTACATTCCTGGAGTCATGTCCATCCTAAGCGTTCTTCCAGCTCCACGGTCATTTCCATTTATTGTGCCTTACCTTCTATTTGAGAACACCATGTCAGTAACTAAATTTAATGCCATGATATCTGGATTATTTCGCTTTGGAAGTTCTTACGAGTGGGTGGTTACAAAAAAATTGGGAAGATCGTCAGAGACAGATTTGGTTGCCTTTGAGAAGGAATCTGAACCTCTAATGCGATCTACTAGTCTTCATAGATCATCCTCAGATTCAGGCATTGAGGAGCTAAGCAAACTAGAGTTGTCAAAGAAAATTGGGAAGACCAAGAGAAATCGTCTCTACAGGAAAGAACTTGCTCTTGCATTCATTTTGTTAACTGCCTCAGTTAGAAGTTTATTATCTGCCCAGGGAATTCACTTCTACTTTCTATTATTTCAAGGGATAAGCTTTCTGGTTGTTGGTCTTGATTTGATAGGAGAGCAGGTTAGTTAA 2061 0.4551 MSRAPNYEFQEWWNKQREKNNLDLLEDKAEQADAPFIAVDVDGGSGVRSDPSVEKERTRSARQLRWVCLLKFQQIAATVAVISNNFFFFLRTANRRIASQDLPADSAHSRLYRAIRVFLIVVIALLGFELVAYFKGWHFRPPAVGSADVMGMVAVVYAWWLEIRVTYLAPPLQSLTNMCIVLFIVQSVDRIVLILGCFWIKFKGIKPVAAVDYEGSVENVEDYPMVLIQIPMCNEREVYQQSIAAVCILDWPKERMLVQVLDDSDEVDTQQLIKAEVHKWQQRGVRIIYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGRDDLALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFVDVLRSKVSWGKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPAWVVCYIPGVMSILSVLPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVAFEKESEPLMRSTSLHRSSSDSGIEELSKLELSKKIGKTKRNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGISFLVVGLDLIGEQVS. 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10415 686 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 156 683 - -
Seca4g10415 686 SUPERFAMILY Nucleotide-diphospho-sugar transferases 223 502 IPR029044 -
Seca4g10415 686 FunFam probable xyloglucan glycosyltransferase 5 217 442 - -
Seca4g10415 686 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 216 441 IPR029044 -
Seca4g10415 686 Pfam Glycosyl transferase family group 2 318 523 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10415 Seca-Chr4 239766668 239773577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10415 1 686 Miscellaneous Gene Families AT3G07330 76.087 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10415 - - gmx:100801779 1149.81