Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10413 ATGGCCTTTAAGCACCTCCTCGCCGCGGCACGCCGCTCTCCTCGCCGCACCTCTGTCGTCCGCTCCGCTTCCACCTCCCCGGCGGCACTCTCCTCCTCCTCCTCCCGTCCTTCCCCACCCGCCCCTCATGTCATGCTCTACGACCGTCTCGCCGAGTCCGTCAAATCCAACCTCCGCCGTCTCGAGAACCCGGACCCTCGCTTCCTCAAACATGGTTCCCCCGTCCCCACCCTCGCTGACCACACGCGTATCCTTTCCGCCCCCGAGACGCGCGTGACCACGCTCCCCAACGGCCTCCGTGTCGCCACCGAGTCATCCCTCGCCACCAAGACCGCCACCGTCGGCGTATGGATCGACGCCGGGTCGAGGTTCGAGACCGAGGAGACGAATGGCACCGCGCATTTTTTGGAGCACATGATCTTCAAGGGAACCGCGAAGCGATCCGCGAGGGAGCTTGAGGAGGAGATTGAGAACATGGGAGGGCATCTCAATGCCTACACTTCGAGGGAACAGACAACGTATTATGCTAAGGTCACGCATGATGATGTGCCTAAGGCGCTTGATATTTTGGCGGATATTTTGCAGAATTCTAAGTTTGATGATAACAGGATCAGCCGCGAACGTGATGTTATTCTCAGGGAAATGGAGGAGGTTGAGGGGCAAACAGAGGAAGTTATTTTTGACCATTTACATTCAACTGCTTTCCAGTACACTCCACTTGGTAGAACAATTCTTGGACCTGCTCAGAATATTAGGACAATCACCAAAGAACACCTGCAGAACTACATTCAGACACACTACACAGCTCCTAGGATGGTGGTAGCTGCATCTGGAGCTGTCAAGCATGAAGATATTGTCGAACAAGTAAAAACATTGTTTACCAAGTTGTCAGCAGATCCCACCACAGCTTCTCAATTAGTTGCAAAAGAACCTGCCATTTTTACTGGTTCTGAGGTTAGAATGTTGGATGATGATATTCCCCTTGCACAATTTGCTGTAGCTTTTGAAGGTGCAGCTTGGACAGATCCTGATTCCATTGCCCTGATGGTCATGCAAGCTATGCTGGGTTCTTGGAATAAGACAGCAGGGGCTGGAAAACACATGGGTTCTGAGTTAGCACAGCGTGTTGGCATTAATGAAGTTGCTGAAAGCATGATGGCCTTCAATACCAATTACAAGGATACAGGTCTTTTTGGCGTCTATGCTGTTGCTAAGAAGGATTGCTTGGATGACTTGTGCTATGCAATAATGTATGAGACAACCAAGTTGGCATATCGGGTTTCAGAAGATGATGTTACACGTGCTCGTAATCAGATACGTTAG 1323 0.5125 MAFKHLLAAARRSPRRTSVVRSASTSPAALSSSSSRPSPPAPHVMLYDRLAESVKSNLRRLENPDPRFLKHGSPVPTLADHTRILSAPETRVTTLPNGLRVATESSLATKTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTAKRSARELEEEIENMGGHLNAYTSREQTTYYAKVTHDDVPKALDILADILQNSKFDDNRISRERDVILREMEEVEGQTEEVIFDHLHSTAFQYTPLGRTILGPAQNIRTITKEHLQNYIQTHYTAPRMVVAASGAVKHEDIVEQVKTLFTKLSADPTTASQLVAKEPAIFTGSEVRMLDDDIPLAQFAVAFEGAAWTDPDSIALMVMQAMLGSWNKTAGAGKHMGSELAQRVGINEVAESMMAFNTNYKDTGLFGVYAVAKKDCLDDLCYAIMYETTKLAYRVSEDDVTRARNQIR. 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10413 440 Coils Coil 149 169 - -
Seca4g10413 440 MobiDBLite consensus disorder prediction 7 42 - -
Seca4g10413 440 SUPERFAMILY LuxS/MPP-like metallohydrolase 86 293 IPR011249 GO:0046872
Seca4g10413 440 Pfam Insulinase (Peptidase family M16) 100 247 IPR011765 -
Seca4g10413 440 Pfam Peptidase M16 inactive domain 254 438 IPR007863 -
Seca4g10413 440 PANTHER METALLOPROTEASE 86 439 - -
Seca4g10413 440 Gene3D - 306 440 - -
Seca4g10413 440 FunFam Putative mitochondrial-processing peptidase subunit beta mitochondrial 326 439 - -
Seca4g10413 440 Gene3D - 77 299 - -
Seca4g10413 440 MobiDBLite consensus disorder prediction 17 39 - -
Seca4g10413 440 FunFam Mitochondrial-processing peptidase subunit beta 77 298 - -
Seca4g10413 440 SUPERFAMILY LuxS/MPP-like metallohydrolase 314 439 IPR011249 GO:0046872
Seca4g10413 440 ProSitePatterns Insulinase family, zinc-binding region signature. 121 144 IPR001431 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10413 Seca-Chr4 239667799 239672473 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10413 K17732 - gmx:100800696 735.717