Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10385 ATGACTGGGACTCCTGAAGAAGTGCCTGTTACTCTTGATCTGCTTAAGCAGAAAATGAGTGAATTTGCAAAGGAAAGGGATTGGGACCAGTTTCATAGCCCAAGGAACCTCCTTTTGGCTTTGGTGGGTGAAGTGGGAGAATTATCTGAGATATTTCAGTGGAAAGGAGAGGTTCCAAAGGGACTCCCAGATTGGAAAGAGGAGGAGAAGGTTCATCTTGGAGAAGAGCTTTCAGATGTATTGCTTTACCTTGTCAGGCTCTCTGACATATGTGGTGTTGATCTTGGAAAAGCAGCTTTAAGAAAGGTTCAACTCAATGCTATAAAATACCCAGTAAAAGTCTATGAAGACCCTTCAACCAACAATCAGGAGGATCAAAGCATCACCAACGTCCCTACCCCAATGAATAATTAA 414 0.4275 MTGTPEEVPVTLDLLKQKMSEFAKERDWDQFHSPRNLLLALVGEVGELSEIFQWKGEVPKGLPDWKEEEKVHLGEELSDVLLYLVRLSDICGVDLGKAALRKVQLNAIKYPVKVYEDPSTNNQEDQSITNVPTPMNN. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10385 137 PIRSF UCP029826_pph 4 125 IPR025984 GO:0009143|GO:0047429
Seca4g10385 137 MobiDBLite consensus disorder prediction 118 137 - -
Seca4g10385 137 PANTHER - 6 124 - -
Seca4g10385 137 CDD NTP-PPase_RS21-C6_like 16 106 IPR025984 GO:0009143|GO:0047429
Seca4g10385 137 Gene3D - 6 116 - -
Seca4g10385 137 Pfam MazG nucleotide pyrophosphohydrolase domain 33 100 IPR004518 -
Seca4g10385 137 SUPERFAMILY all-alpha NTP pyrophosphatases 11 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10385 Seca-Chr4 239405907 239407527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10385 K16904 - gmx:100500214 211.46