Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10368 ATGAACCAAACCACCATGGGGTTTGAAAAGGCAATAGGATATTACGCTCCCTCAGTTCAAGAGCTTATTGTTATTGATGATGTGCTCTCGGCCATGGTTGGGGTTGAAGGACGTTACATTTTAATCAAAACAGTTCGTGGAAAGAAGGATGATATTACTTTCCTGGTTGACCCATCTATGGATTTGGCACTGCAGGAGTTGGCAAAACGGATTTTCCCTCTTTGTAGGAGCTTTCTGCTGATCAACCAGTTTGTAGAGTCAAGGTCTCAGTTCCAGAATGGCCTAGTTAATCATGCCTTTTCTGCTGCATTGAGGGCACTTCTTCTCGATTACCAGGCCATGGTGGCACAACTTGAGCACCAATTTCGGCTTGGGAGACTTTCCCTTCAAGGATTGTGGTTCTACTGTCAGCCCATGATGAGGTCAATGCAGGCATTATCCACTGTCATACAGAAGGCTTCGGACAACAATTTTTCTGGTTCTGCTGTTCTTAACTTACTGCAGAGTCAGGCAAAGGCTATGGCTGGAGATAATGCTGTCAGGTTGTTGCTGGAGAAAATGACACAATGTGCAAGTAGTGCTTACATGAGCATATTAGAAAGATGGGTCTATGAAGGAGGAATAGATGATCCTTATGGTGAATTTTTCATTGCAGAGGACAAATCTCTTCAAAAGGAGAGTCTCACTCAAGATTATGATGCTAAGTACTGGCGACAACGTTACAGCCTCAAAGATGGAATTCCTAGTTTCCTTGCAAATATTGCGGGGACAATTTTGACCACAGGAAAATATCTAAATGTCATGAGAGAATGTGGGCACAATGTTCAGGTCCCTCCATCAGAAAATTCAAAACTAATGAGCTTTGGCTCAAATCATCATTATCTTGAATGTATTAAGGCTGCTTATAACTTCGCAAGTGGTGAACTCTTGAATCTCATTAAGGAAAAGTATGATCTAACGGGAAAGCTGCGCTCTATAAAACATTACCTTCTTCTTGATCAGGGCGATTTCTTAGTACATTTTATGGATATTGCTCGAGACGAGCTGGCCAAAAAGCCTGATGAAGTCTCGGTTGAGAAGCTGCAGTCTCTTCTAGACCTTGCTTTGCGTACTACAGCAGCTGCGGCAGATCCTTTTCATGAAGGCTTAACCTGTGTTGTGGAAAGATCTTCTTTGCTTAAAAGGTTGGGCACATTTAATGACCTTGAAATTAGCCAGAGAAATTCTGGTAACAATGATCTACTGGAGGAGCCTGTTAGCATCACTAGCCTAGAGACATTTTCACTAAGTTACAAGGTGCACTGGCCACTTTCTATAGTATTATCACGTAAATCCCTTACAAAGTACCAGTTAATTTTTCGATTTCTTTTCCACTGCAAACATGTTGACCGTCAACTATGTGGAGCATGGCAAGTACATCAAGGAGTTCGTGCTCTCAATACACGTGGAACTGCTATCTCCAGATCATCTCTTCTTTGTCGTAGTATGCTTAAATTTATCCATAGCCTTTTGCACTATCTAACATTTGAGGCAAGTTTTACTTTTTTTTTGACTTACACACACGTGCGCACACACACAGAGGGCATATCAAGTGATAGGTGA 1602 0.4189 MNQTTMGFEKAIGYYAPSVQELIVIDDVLSAMVGVEGRYILIKTVRGKKDDITFLVDPSMDLALQELAKRIFPLCRSFLLINQFVESRSQFQNGLVNHAFSAALRALLLDYQAMVAQLEHQFRLGRLSLQGLWFYCQPMMRSMQALSTVIQKASDNNFSGSAVLNLLQSQAKAMAGDNAVRLLLEKMTQCASSAYMSILERWVYEGGIDDPYGEFFIAEDKSLQKESLTQDYDAKYWRQRYSLKDGIPSFLANIAGTILTTGKYLNVMRECGHNVQVPPSENSKLMSFGSNHHYLECIKAAYNFASGELLNLIKEKYDLTGKLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLALRTTAAAADPFHEGLTCVVERSSLLKRLGTFNDLEISQRNSGNNDLLEEPVSITSLETFSLSYKVHWPLSIVLSRKSLTKYQLIFRFLFHCKHVDRQLCGAWQVHQGVRALNTRGTAISRSSLLCRSMLKFIHSLLHYLTFEASFTFFLTYTHVRTHTEGISSDR. 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10368 533 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 13 510 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Seca4g10368 533 Pfam Gamma tubulin complex component C-terminal 319 511 IPR040457 GO:0043015
Seca4g10368 533 Gene3D - 319 518 IPR042241 -
Seca4g10368 533 Pfam Gamma tubulin complex component N-terminal 25 316 IPR041470 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10368 Seca-Chr4 239208056 239224571 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10368 K16569 - gmx:100795585 931.398