Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10358 ATGGCTACACCAAAAGAGCACGTTGAACAAATACGAAGGACAAAGTTCTCCATTGGCGGGGAACCGAACCCTTTGACTGAGGATCTGCATCAAGCGGTTAAGAATCTCTCCGCTGAACTTTATGCCAAAGATGTTCATTTTCTCATGGAGCTCATTCAGAATGCTGAAGATAACCAGTACATTGATGGGGTGAGGCCATCACTTGAGTTCATCATAACTTCTGAGGACATAACAGCTACTGGTGCACCAGCCACATTGCTAATATTCAACAATGAAAAGGGTTTCTCTCCCAAAAACATTGAATCTATCTGCAGTGTTGGACGGTCCACAAAGAAAGGCAACAGGAGCAGCGGTTACATAGGCGAGAAAGGAATTGGTTTCAAGAGTGTATTTCTTGTTACTGCTCAGCCTTATATTTTCAGCAATGGATATCAGATAAGGTTCAATGAGAGGCCTTGTCCACATTGCAATCTTGGGTATATAGTTCCTGAATGGGTTGAGGAGAAACCAACCCTTATTGACATAAAGCGGATATATGGTGCTGGTAAAGATTCCCTTCCAACTACAACAATTGTCTTACCTCTGAAGCCAGACAAGGTCAAACCTGTGAAACAGCAGCTGTCAAGCATTCATCCAGAAGTTCTTTTGTTCCTTGCAAAAATCAGACAGCTTTCTGTCAGAGAAGATAATGAGGATCCCAAACTGAATACTGTGAGTGCTGTTTCTATTTCAAGTGAGATTAACTTTGTCACAAGGAAGAACATGAATGCTGAGTCTTACACACTCCATCTCTCTGCCGAGGAAAATGATGATGCTGAGAAGGAATGCAGCTACTACATGTGGAAGCAAAAGTTTCCTGTCAGATTGGAAAATGTAGTTGAAAGGAGAACCGATATGGAGGAATGGGTTATAACGTTGGCCTTCCCCAATCATGAGAGGCTTCACAGGGGAATGAGCTTACCAGGGGTGTATGCATTTCTTCCTACAGAGATGGTCACTAATTTTCCATTCATAATTCAAGCAGATTTTGTCCTGGCTTCATCAAGGGAGACGATTCTCTTGGATGATAAGTGGAACCAAGGGATACTTGAATGTGTTCCATCAGCTTTTATGGATGCATTCAAGACACTTGTTGTAGGATCAGATCAAGCTCCAGTATCCAGTTTGCCTCGGATGTTCAAGTTTCTTCCCATTGATAGTTCTCCCTTTGAGAAGTTAAATTTTGTGAGGGAGAAAATCAAAGAAAAACTTCTTGTAGAAAATATTGTTCCTATTGAGACATACACAAAACAGAAGCACTTCTATAAGCCTTGTGAAGTTGGCAGGCTATTGCCTTCATTTTGGAGTATTTTGACTAAGGCTCGGGCAGAAGGAGTTTACTTGCTTGACTTGTCATCTCATGATGGGAGGAAAATCTTGAGTTCATCATTTGATAGAGGCGAGTATGATAGCATACTCAAATTTTTAGGGGTTAAACAGGTGAATGTTGATTGGTATGCAAAGTGCATCCAGAGTTCTGATCTTGTGGATGGTGTGTCAGAAGATGTCTATCTCGAGCTGTTACTGTTTGTTGCTAAAAACTGGTCAAGGTTTAAGGGCTCTAACATGGTGAATATTCCACTGATTAAATATGTGGATTCTGATGGGAGTCTGTCCCATTTCAGTTTACAGCAATGTGAGGGTGCCAGACGAGTAGTCCTAGCTGATTCAAGCCAGTCTTGTCCTTGCTCTTGGCTGATTGATTGGAATAAGGAATTTGCATGTGCAGCCAACAGGTTTTTTATGCCAGAAATCACACAAAAAGCTATCTTGAGATTGACCCAGAAGCAGACTTTGTTGGAATGGCTAGAAAATCAGGTTAATATTACTACTTTGAACATGTATGCTTTTGCAAATCTCATTTTCAAGTCCATTAAAACAAACTGCAAGCTTGCGATTGCATATGCTCATTTCTTATATCACTCTCTGTCAAAGCTTTATTTATCAAATCGGGAGGTTAGTGCTTTATGTAGCTCTATGCCACTTGTGGACAACTATGGATGTGTGACTGAATGCAGAAAGGGGGTTCTTGTGCCTGCAAATGTGAGCAAATGGGCAGACTTGATTGGTTCTAATCCATGGAGAAATGAAAATTATGTTGAGCTGGGAAAGGAGTACTTGCGTTCATCTTATTATGCAGACCAGTGTACAGGTTCTGGGAAGCTCATTGAGTTCCTCAAAACTCATGTTGAAGCTGCTGACATACCTTATATATCTCCTCCAAATGCTGGGTTTTCTGCTGTAGATACACCACTTACCAAAGACAATGCCTTTTTGCTTTTGGATTGGATTCGGAACCTGAGGCAAAGGGGTGTGCGTCTACCAGAGAAGTTCTTGAAATGTATAAAAGAAGGGAGCTGGCTTCGAGTTACCGTCAATGGATGCAGGCCTCCTTGCAAGTCATTCTTAATTCGCTCATCATTGGGAAGAATTTTGCAAAATGGTTCTGTTCTTGTTGATATTCCATTGATTGATGAGAGCTTCTATGGGGACAGGATAAATGAATATGAGGAGGAGTTGAAAACTGTTGGGGTGATGTTCAGTTATGAGGAAGCATGTGCATTCATTGGAAGAGAACTTATGTCTCGTGCAGCTTCTTTCACCTTAAACAGGAGACATGTTCTTTTGATGCTTAACTTCATCCAATATCTCAGGAAAAGTCTTCTTCCTTTAGACAAATTTGTCAAAAGCATCAAAGAGGGAAGTTGGCTAAAGACATCTCATGGTCTCAGGTCTCCTGTTGGATCTGCATTGAATGATTCAGGATGGCGAGTTGCATCACAAGTAAGTGATATCCCTTTCATTGATCAGGCTTATTTTGGTGAGGAAATATATAATTTCAAGGAGGAGCTCAAGTTGCTAGGAGTAATAGTTGGCTTCAGTGGAAATTACCAAGTGGTCATTGACCATTTAAAATCACCCTCTAATTTGGCCTTTTTGACAGCTGAGGCTGTTCTTTTGATAATGGAATGCATAAGAGTCATGCAAGCCCCTAGTAAACTCTTGAATTCAATCAGTAAAACGAGCTGCTTGAAGACAAACTTGGGTTTTAAAACACCAGGTGAATGTTTCTTGTCTGACCCTGTGTGGGGCTGCATTTTGGAGGTATTTAATGGCCTTCCCATTATAGATCATGAATTCTATGGAGAGAATATTTTCACTTACAAAGATGAATTGAAGCAAACAGGGGTGGTGGTTGATTATGAGGTTGCTTTCCAAAAATTTGCTCGTCTCTTCAAGGAGAAGGCATCACAAAATTCATTTAACCCTCAACATATTAAGTCATTTCTCTCCTGTTGCAGGCTGCTGAAGGAATCTAAATCTAGATTTCCTTCTGATTTCTCAATAATCATACGTACTAAGGCATGGTTGCATACCAGGCTAGGTTCTTATAGCTGCCCAGGACAATGCATTTTATACGGTCCGGAGTGGAAAGCTATCTCTTTAATAACACGTCTCCCTTTCATTGATGACAGTGATAAGTGTTATGGTATGGGAATCCATGAGTACAAGAAAGAGCTGAAGAGACTTGGTGTTATTATTGAATTGAAAGATGGGAAGGAGTTTGTTCCTAAATGTCTTAGTTTTCCTTCAGATCCCTCCACCATTGCTCCAGAAAGTGTATTTTGTTTCCTGGAATGCATCCGGCTTCTAATGCCAGTGCCAGATCAAAAACTTTCCATTGATGATGAATTCTCCAAAAGATTGTCCAGAAATTGGTTGAAGACCCATGCTGGTTATAGGCCACCAGATAAGTGCTTGTTGTTTGATTCCAATTGGAGCTCTTACCTGAAGCCAACTGATGGGCCATTCATTGATGAGAATCTTTATGGACCCAAAATTGCATCTTACAAGAAAGAACTCAATGCAGTAGGAGTCACTGTTGATGTTGAGAAAGGGTGCTTTTTGGTTGCCAATCACCTGGACTTTCTGTCTGATTCTAACTCCATTGTGCAAGTATATAGGTACTTGAGTCGACATGATTGGAAACCTGAGGATAAAGTTGCCATGAAGATTTGGATTCCTAATGCAGTTAAAGGTGGAAAGTGGGTCAATTCTGAAGAATGTGTCATTCATAACCAGGATAATCTGTTTGGTTCAAAATTTTATGTTCTGGAAGACATCTATGATAAGAAGCTTCTTCCTTTCTTCTCCTTTGCCATGAATGTCCGGAACAAGCCCTCACTTGATGATTATGTCGACCTTTGGAATGATTGGGAGAGTTCAGTGGAACAATTGTCATATGACAAGTGCTGTAAGTTCTGGATGTTTATCTTGAAACATCTGAGCACAAATATGGAGAAGAAACTTTCTGACAGTGTGATGAAACTACCTGTAACATCTGGAGACAATGAAATATTTTTGCTAGATAAGGAGGATGTTTTCATTCCTGATAATCTCCATCTGAAGAAGCTTTTTGAGCAGGAAAAAATTTTTGTGTGGTGTCCTCAGCAGAACCTGTCTCCTTTGTCCAGGTGTAAATTATTTGACATTTACAAAAAAATTGGTGCTCGAAATATCTCTGAATATCTGTGCAAAGAAGAATCATCCATATTAAATGGTGTTGAGCTCAAGCAGGTTTATCCAAATGATATTTTCAACTTAAAGGGGTTAGTTAAGCTTATTCTTGGTTTTCTTGCTTGTTCTAGCCTAAAAATGGAACCAGAAAAGAGGCATGAAGCTGTTCAAGGTCTTCTCAACCTGAGCTTTTTTGAGGCAGTGGAGCCAGTTACTACTGTAAGCTATAGTTTATCCTTATCATCAGGGGACACCATTACCAAGAAAGCAAACAGAATGGTACGCTGGGAAAGGCAAAGTTCCAAGTTTTTCACCCAGAAGATGAAAGGGCTTGCTGGAAATGCACTGAAATATGCCACATATTTCTCTGAAGCAATATCAGAGGGTGTTCTGCGTGAGAATCATGATCATGTACCTGCACTCACTGAGCTTATCAAATTGGCTTTTGTGCTGAAATTCAAGAATGAAGAAATTGAATTTCTAATGGAATCCAACAATTTGCAGATTTTCTGTAAGGATGAGGAGTTCCTCAGTTCTGCCTTCCCATCTGACTAA 5112 0.4028 MATPKEHVEQIRRTKFSIGGEPNPLTEDLHQAVKNLSAELYAKDVHFLMELIQNAEDNQYIDGVRPSLEFIITSEDITATGAPATLLIFNNEKGFSPKNIESICSVGRSTKKGNRSSGYIGEKGIGFKSVFLVTAQPYIFSNGYQIRFNERPCPHCNLGYIVPEWVEEKPTLIDIKRIYGAGKDSLPTTTIVLPLKPDKVKPVKQQLSSIHPEVLLFLAKIRQLSVREDNEDPKLNTVSAVSISSEINFVTRKNMNAESYTLHLSAEENDDAEKECSYYMWKQKFPVRLENVVERRTDMEEWVITLAFPNHERLHRGMSLPGVYAFLPTEMVTNFPFIIQADFVLASSRETILLDDKWNQGILECVPSAFMDAFKTLVVGSDQAPVSSLPRMFKFLPIDSSPFEKLNFVREKIKEKLLVENIVPIETYTKQKHFYKPCEVGRLLPSFWSILTKARAEGVYLLDLSSHDGRKILSSSFDRGEYDSILKFLGVKQVNVDWYAKCIQSSDLVDGVSEDVYLELLLFVAKNWSRFKGSNMVNIPLIKYVDSDGSLSHFSLQQCEGARRVVLADSSQSCPCSWLIDWNKEFACAANRFFMPEITQKAILRLTQKQTLLEWLENQVNITTLNMYAFANLIFKSIKTNCKLAIAYAHFLYHSLSKLYLSNREVSALCSSMPLVDNYGCVTECRKGVLVPANVSKWADLIGSNPWRNENYVELGKEYLRSSYYADQCTGSGKLIEFLKTHVEAADIPYISPPNAGFSAVDTPLTKDNAFLLLDWIRNLRQRGVRLPEKFLKCIKEGSWLRVTVNGCRPPCKSFLIRSSLGRILQNGSVLVDIPLIDESFYGDRINEYEEELKTVGVMFSYEEACAFIGRELMSRAASFTLNRRHVLLMLNFIQYLRKSLLPLDKFVKSIKEGSWLKTSHGLRSPVGSALNDSGWRVASQVSDIPFIDQAYFGEEIYNFKEELKLLGVIVGFSGNYQVVIDHLKSPSNLAFLTAEAVLLIMECIRVMQAPSKLLNSISKTSCLKTNLGFKTPGECFLSDPVWGCILEVFNGLPIIDHEFYGENIFTYKDELKQTGVVVDYEVAFQKFARLFKEKASQNSFNPQHIKSFLSCCRLLKESKSRFPSDFSIIIRTKAWLHTRLGSYSCPGQCILYGPEWKAISLITRLPFIDDSDKCYGMGIHEYKKELKRLGVIIELKDGKEFVPKCLSFPSDPSTIAPESVFCFLECIRLLMPVPDQKLSIDDEFSKRLSRNWLKTHAGYRPPDKCLLFDSNWSSYLKPTDGPFIDENLYGPKIASYKKELNAVGVTVDVEKGCFLVANHLDFLSDSNSIVQVYRYLSRHDWKPEDKVAMKIWIPNAVKGGKWVNSEECVIHNQDNLFGSKFYVLEDIYDKKLLPFFSFAMNVRNKPSLDDYVDLWNDWESSVEQLSYDKCCKFWMFILKHLSTNMEKKLSDSVMKLPVTSGDNEIFLLDKEDVFIPDNLHLKKLFEQEKIFVWCPQQNLSPLSRCKLFDIYKKIGARNISEYLCKEESSILNGVELKQVYPNDIFNLKGLVKLILGFLACSSLKMEPEKRHEAVQGLLNLSFFEAVEPVTTVSYSLSLSSGDTITKKANRMVRWERQSSKFFTQKMKGLAGNALKYATYFSEAISEGVLRENHDHVPALTELIKLAFVLKFKNEEIEFLMESNNLQIFCKDEEFLSSAFPSD. 1704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10358 1703 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 28 200 IPR036890 -
Seca4g10358 1703 Gene3D - 9 217 IPR036890 -
Seca4g10358 1703 PANTHER WU:FJ29H11 2 1695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10358 Seca-Chr4 239124646 239131904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10358 - - gmx:100800765 2617.8