Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10357 ATGAGTGGAATGGAGAGAGTGGAAGAAGAAACTCCATTATTTGGGGGGAAAATGAGAGAGGCTCAAAAGGCCGCAATGGCTAATCGATGGGAACAATTCAAGAAAATAATGAAGGAATTAGAAGACAAGAAAAACTTGCTTGAGTGGTTTGATCTGTTTGGGAACACAGCCATCCATGTTGCAACTCGCTCTAACAATCCACAAATCCTAAGAGAATTGTTAGAAACTTTACCTGAAGAAGAAAGGTGGAGGGCTTTGTGGAAGGAGAATCGTGAAGGGAACACTGTTTTACATGAGGTGGCGTTTTGCAAAAAGGTAAACATGGCAAATGTTGTGTTTGAGTTTGAAGAGAATCTAAGGCCAGAGGAGGAAGAAATTAGGAAAGGGTTGCCATTACTATTGGAGTGCAAAAACCACAAAGGTGAAACCCCTTTGTTTAGGGCTGCAAAGTATGGGAAGCTCAAGATGCTCAAACATATGGCAAATCATATGGCCATAAATAATAAGGGAGACATTTGTAAACATTTGCATAGAGGTGACAATTACTCTGCTCTTCACGCTAGTGTCATTGGCCAACATTTTGATGTTGCACTTTGGTTAGTGAGAATGGACAGAAGACTAGCTATGGAAAAGGATCAGAACGGATTTACATGTCTTCAACTACTTTCCAAAATGCCACATGTTTTCCGTAGCCATTGTCCCATGGGAGCAGTGAAGAGCCTCATATACCATTTGCTTCCTGATGAAGGATATGAAATTGAAGAGGGTGAAAGCCTTCACTTGTTTAAACATAAGAGAGATTTAGAAAATGGTAAAATGGACGAAAGGGAACTCCCCAAATCAGTTATTTCAAAGATCAACTATGGTTTCTGGAAACGCTTTGCAAAAGGTGCGAACTACAGTTGCCAGTTTGATGGGATTGATCATATGTGGCAGCAAAAGAAGAAGCACCGATTAGCAGAGTGTCTAGCAGACATTTTAGTTCAATATGACTTATCATGGCAGACATCTTTTAATGACTATAAAAAGACACTGATCGCAATGCCACCACTTCCCTTCAATGTGGCCAAAAGGAGAAAGCAAATTGAGTCCAAGAGGCAAGAGAAGCGCGAGAGCCATGACGAATCCCTCACATATAATTACACACCACTACTCTTAGCAGCTAGCACTGGAATTGTAGAAATTGTTGAAAAAATCCTTTATGTGAATCCTGAGGCCATTAATCATGTTAGCAAGGATGAACAAAACATACTTCACATGGCCATCAAGCATCGCCAGAAGGAAATATTTCGTATCATAAAGAGAAAAAAAGCAATTAAATCATTGGTTTCTAGGATCACAAAGGAAGGCCGCACAATCTTGCACCAAGTTGCAAGGATGGATTATTACAAAGGAGGACACTTAGCAGGAGTGGCATTTCAGTTGCAAGATGAGTTGCGTTGGTATGATCGAGTGAGAAAAATAGTTCCTCATCACTTCTTCATGCATTGTGACCAAGACGGGCAAACGGCAGAAGATGTTTTGGACATAGAGCATGATGAAATGCTTAAAAATGCACAGAAATGGCTAAAGGAAACAGCTCAATCATGTTCCACTGTTGCTGTTCTTGTTGCCACAGTTGTGTTTGCTGCTGCTTACACCATTCCTGGTGGAAGTGAAGGAGGCACCCCAGTGTTCCTTCGTTCTCCTATTTTCCTCTTTTTCACCATTATGGATGTTGTGGGTCTTGCCACCTCACTAGCTTCAGTGGTGATGTTCCTTTCTATCCTCACTTCCCCATGTGAATTGTGGGATTTTCATAAGTCTCTCCCTCGAAAACTGAATTGGGGGTTTGCTTTATTGTTCTTCTCGTTGATGACAACAATGCTCGCATTTAGTGCAACCATTTTGCTGACCATTCGATTGGAGTGGAAGAATTGGACTTCAACTTTGATATACGGTGCTGCCTTTTTTCCTGTCACTGTATTTGCGATAATTCAATTTCCTGTTTATGTGATGGCTGAAAACATTGTTAAGCAAATTGGCAAGCATATTAAGAAGGTCATTCCAACTAGATTGATTAGATGTTTCACGAAAACAATGGAGAAAAGATTACTTTAA 2100 0.4057 MSGMERVEEETPLFGGKMREAQKAAMANRWEQFKKIMKELEDKKNLLEWFDLFGNTAIHVATRSNNPQILRELLETLPEEERWRALWKENREGNTVLHEVAFCKKVNMANVVFEFEENLRPEEEEIRKGLPLLLECKNHKGETPLFRAAKYGKLKMLKHMANHMAINNKGDICKHLHRGDNYSALHASVIGQHFDVALWLVRMDRRLAMEKDQNGFTCLQLLSKMPHVFRSHCPMGAVKSLIYHLLPDEGYEIEEGESLHLFKHKRDLENGKMDERELPKSVISKINYGFWKRFAKGANYSCQFDGIDHMWQQKKKHRLAECLADILVQYDLSWQTSFNDYKKTLIAMPPLPFNVAKRRKQIESKRQEKRESHDESLTYNYTPLLLAASTGIVEIVEKILYVNPEAINHVSKDEQNILHMAIKHRQKEIFRIIKRKKAIKSLVSRITKEGRTILHQVARMDYYKGGHLAGVAFQLQDELRWYDRVRKIVPHHFFMHCDQDGQTAEDVLDIEHDEMLKNAQKWLKETAQSCSTVAVLVATVVFAAAYTIPGGSEGGTPVFLRSPIFLFFTIMDVVGLATSLASVVMFLSILTSPCELWDFHKSLPRKLNWGFALLFFSLMTTMLAFSATILLTIRLEWKNWTSTLIYGAAFFPVTVFAIIQFPVYVMAENIVKQIGKHIKKVIPTRLIRCFTKTMEKRLL. 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10357 699 Gene3D - 20 253 IPR036770 -
Seca4g10357 699 PANTHER CASKIN 55 665 - -
Seca4g10357 699 SUPERFAMILY Ankyrin repeat 24 227 IPR036770 -
Seca4g10357 699 Gene3D - 356 537 IPR036770 -
Seca4g10357 699 SMART ANK_2a 53 82 IPR002110 GO:0005515
Seca4g10357 699 SMART ANK_2a 413 442 IPR002110 GO:0005515
Seca4g10357 699 SMART ANK_2a 180 209 IPR002110 GO:0005515
Seca4g10357 699 SMART ANK_2a 92 121 IPR002110 GO:0005515
Seca4g10357 699 SMART ANK_2a 379 409 IPR002110 GO:0005515
Seca4g10357 699 SMART ANK_2a 140 169 IPR002110 GO:0005515
Seca4g10357 699 Pfam Domain of unknown function 520 630 IPR026961 -
Seca4g10357 699 SUPERFAMILY Ankyrin repeat 378 462 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10357 Seca-Chr4 239101134 239107687 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10357 322 647 Miscellaneous Gene Families AT3G12360 24.468 3.02e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10357 - - gmx:100788731 926.006