Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10348 ATGTCTTCAACGTCAACTTCCAGAAACGAAACGACGCCCTGTCCTATCAAAACCGTCGTCGTTTTGGTCCAAGAGAACCGTTCCTTCGACCACATGCTGGGTTGGATGAAGTCCCTCAACCCAGAAATCGACGGGGTCACAGGTTCAGAATCAAACCCGGTCTCCACACCAGACCCCAACTCGAACCGTATTCTCTTCGCCGACCGGTCCGGTCACGTCGAACCGGACCCAGGCCACATGATCGACGATGTCTACGAGCAAGTCTTCGGGGAGCAATGGAGCGAGGTCTCGGCGGCGAAGAAGCTGCCGCCAACAATGGAAGGCTTTGCTCAGAACGCCGCAAGGCAAGTGAGGACGGGTGCGACGGCGGAGACAGTGATGAACGGATTCAAACCGGAGCTGGTTCCGGTCTATCAAGAGTTACTGAAGGAGTTTGCGGTTTGTGACCGGTGGTTCGCGTCGGTTCCCGGTCCAACTCAACCGAACCGGCTTTACGTGCACTCTGCGACGTCGTATGGGTTGACCACGCAGGACGTGAAGAAACTAATTGGGGGTTTGCCTCAGAAAACAATATTCGATTCTTTGGACGAAAATGGGTTCAGTTTTGGAATCTATTATCAATACCCTCCATCTACTCTTTTTTATCGGAATCTTAGGAAACTGAAATACACAGACAACTTTCTTCAATACGATTTAAAGTTCAAGAAGCATTGTGAAGAAGGGAAACTCCCAAATTACGTGGTGGTTGAACAAAGATACTTTGATTTGTTATCACTACCGGGGAATGATGACCATCCATCTCATGATGTTGCGGAAGGACAAAAATTTGTGAAAGAAGTGTATGAAGCACTAAGAGCAAGTCCACAATGGAATGAAATATTGTTTGTGATTATATACGACGAGCATGGTGGCTTTTATGATCATGTGCCTACTCCTGTGTATGGAGTTCCTAGTCCAGATGGCATTGCAGGTCCTGATCCATTCAAATTTCAATTTGATAGGCTTGGTGTTAGGGTTCCAGCCATCATTATTTCTCCATGGATTGAACCAGGCAAAGTGTTGCACGAACCTTCTGGACCATTCCCAACATCACAGTATGAACATTCATCTATACCAGCAACTGTAAAGAAGATATTCAATCTACCTGAGTTTTTGACCAAGCGTGATGCATGGGCTGGAACACTTGATGGTCTCTTAACTCTCACCACCCCACGAACTGATTGTCCAGTGAAATTGCCTGACCCTATCAAACTAAGAGAGACTGCAGCTAATGAAGAGGCGAAATTGAGTGAATTTCAGGAAGAATTGGTACAATTGGCAGCAACTTTGAATGGGGATCATAGAAAGAGTACATACCCCAACAAGTTAACTGAGAACATAAGTGTTTCAGAGGCAGTTAAATATTGTGAAAATGCATTCAGGACATTCTTAAATGAGTGTGAGAAAGCAAGGCAAAGTGGGGTTGATACATCTGAAATTGTCCATTGTGCTAGACCACATATGGCACCACAATCCAAAACATTCTTCCACAAGTTGTTATCTTGTTTAACCTGTGATCGATAA 1563 0.4549 MSSTSTSRNETTPCPIKTVVVLVQENRSFDHMLGWMKSLNPEIDGVTGSESNPVSTPDPNSNRILFADRSGHVEPDPGHMIDDVYEQVFGEQWSEVSAAKKLPPTMEGFAQNAARQVRTGATAETVMNGFKPELVPVYQELLKEFAVCDRWFASVPGPTQPNRLYVHSATSYGLTTQDVKKLIGGLPQKTIFDSLDENGFSFGIYYQYPPSTLFYRNLRKLKYTDNFLQYDLKFKKHCEEGKLPNYVVVEQRYFDLLSLPGNDDHPSHDVAEGQKFVKEVYEALRASPQWNEILFVIIYDEHGGFYDHVPTPVYGVPSPDGIAGPDPFKFQFDRLGVRVPAIIISPWIEPGKVLHEPSGPFPTSQYEHSSIPATVKKIFNLPEFLTKRDAWAGTLDGLLTLTTPRTDCPVKLPDPIKLRETAANEEAKLSEFQEELVQLAATLNGDHRKSTYPNKLTENISVSEAVKYCENAFRTFLNECEKARQSGVDTSEIVHCARPHMAPQSKTFFHKLLSCLTCDR. 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10348 520 Pfam Phosphoesterase family 16 382 IPR007312 GO:0016788
Seca4g10348 520 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 4 480 IPR007312 GO:0016788
Seca4g10348 520 Gene3D Alkaline Phosphatase, subunit A 6 202 IPR017850 -
Seca4g10348 520 Gene3D Alkaline Phosphatase, subunit A 245 428 IPR017850 -
Seca4g10348 520 Coils Coil 422 442 - -
Seca4g10348 520 FunFam Non-specific phospholipase C1 242 427 - -
Seca4g10348 520 SUPERFAMILY Alkaline phosphatase-like 184 357 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10348 Seca-Chr4 239036020 239043554 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10348 6 516 Acyl Lipid Metabolism Gene Families AT3G03530 62.313 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10348 K01114 - gmx:100789421 870.537