Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10325 ATGGAAGACACGGATTCAGTTACGAAACTGATAGATTCTACATCTTCTAAGATACAACAGCTGCAAAAAGCATTTGCTGAACTTGAAAGTTATCGAGCTGTTACTCTTAACTTGAAATGGAAAGAACTAGAGGAACATTTTCATGGGCTTGAGAAATCCTTGAAGAGGCGCTTTCATGAATTGGAAGACCAAGAAAAAGAGTTTGAAAATAAAACAAGGAAAGCTCGTGAAGTATTGGAGAAGCGGGAAGCAGCTGTCTTTGCCAAGGAGCAAGCCTCACTGCAGAGGCTTCAAGATAAAAGAGATGCTGCTGTATTTGCTATTGTAAATGCTCGGGAAAAGCCCAGGAAGGTTTCATCAAGTGTATTGGCTATTATCTCTAATGGGGGTCAAGGGACGTTGGATGTGAAGGAGAAACCGGTTGATGTTTCTATTGCAGCTGAAGGTAACTTACAAGATGTGAAACTTTCTCCTGAAAACAGAAATGTGGAGTTGATGTCTTATCCAGAGTTGGTAAAACTATGTAAAGATATGGATGCAGCTGGACTTCACAAATTCATATCTGATAACCGCAAGAACCTTGCTGCTGTAAGGGAGGAAATACTGAATGCATTAAGAGCTGCTCCTAATGCTGCTTGTTTAGTTTTAGATTCTTTGGAAGGATTTTACTCTATGGAAGTGACAAGTCAGGATATAAAGAAGGATGCTAACTTACTAGGTCTTCGCCGAACCTGTATCATGCTGCTGGAATGTCTAAGTGATTTCCTGACCAATTCAGACTGTGCTTCTAATGTAATATCAGAGGATATCAAGGACAGGGCAAAGGCAGTTGCTGAAGAGTGGAAACCTAGATTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTGCAACTTCTAGCCAGCTTTGGTATTGCCACTGGTTTTAATGAGGAGGAGTTATCTAGGCTAATTCCAACGGTGTCTCGACGTCGCCAAACTGCTGATTTATGCCGTTGCCTTGGGTTGTCACAGAAGATGCCTGGTGTAATTGAAGTTTTGGTAAACAGTTGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTCACAGAACACTTTTCACCTGTTCCTTTACTGAAGTCATACTTGAAAGATGCTAAAAAAGCTTCTTCTCCAGTCAAAAGTGTTAACTCATCTCCCACTGCTCAGATTGAGGTCAGTGAACGAGAGCTGATTGCTCTTAAGGCTGTAATAAAATGCATTGAAGAACATAAACTTGATGAGCAGTTTCCTATGGATCCTCTCCAAAAACGAGTGATCCAACTAGAGAAAGCCAAGGCTGACAAGAAGAGGGAAACTGAAGCAACAAAGCCTCAACCCAAGAGACCCCGTGCTAATGGTGTGGGATATGGTCCTCGTGTCACTAACATTCCTTCTGACAAAACTTCCTATGCTAGAGTTGCTGACAGGTACCCCCAGTTTGTGTATGACCGACCTTACATGTACCCTGGACCAACTGACAATCATTGTGCCCCTTTCCTGGGTTCTGCAACTTATAACGTCCCTCATAATCCTGGAAACTACTTTGGAAATGGCATCTTTGCCATGGAAAAAACAGATCCAGTTGCTACACTGATAGATTCTACAACTTCTAAGATACAACAGCTGCAAAAGGCATTTGCTGAACTTGAAAGTTACCGAGCTGTCACTCTTAACCTGAAATGGAAAGAACTTGAGGAACATTTTCATGGGCTTGAGAAATCCTTGAAGAGACGCTTCCATGAATTGGAAGACCAAGAAAAAGAGTTTGAAAACAAAACAATGAAAGCTCGTGAAATGTTGGAGAAGCGGGAAGCAGCTGTTTTTGCCAAGGAGCAAGCCTCATTGCAGAGGCTTCAAGAGAAAAGAGATGCTGCTTCATTTGCCATTGTAAATGCTCGAGAAAAGTACAGGAAGGTTTCACCAAAAGATTTGGCTGTTGTCTCTAATGGGAGTCAAGGGACACACGTGGAGGAGAAACCAGTGGATGCTGTTTCCAATGTAACTGATGGTAATTTAGAAGATGTGAAACTTTCTCCTGGAAATGGAAATGTTGAGCTGATGTCTTATCCAGAGTTAGTAAAACTATGTAAAGAGATGGATGCTGCTGGACTTCACAAATTCATATCTGATAACCGTAAGAACCTTGCTACTATAAGGGAGGAAATACCACATGCATTAAGAGCTGCTCCTAATGCTGCCCATTTAGTTTTAGATTCTTTGGAAGGATTTTACAGCATGGAAGTGTCAAGTCTGGATATTAAGAAGGATGCTAACTTGTTGGGTCTTCGCCGAACCTGTATCATGCTGATGGAATGTCTAAGTGATTTCCTGACCAATTCAGACTGCGTTTCCAATTTAATTTCAGAAGATATTAAGGACAGGGCAAAGGCAATTGCTGAAGGGTGGAAACCAAGATTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTGCAACTTCTAGCCAGCTTTGGTATTGCCTCTGGTTTTAATGAGGAGGAGTTGTCCAGGCTAATTCCAGTGGTGTCTCGTCGTCGCCAAACTGCTGATTTATGTCGTTGCCTTGGGTTGTCAGAGAAGATGCCTGGTGTAATCGAGGTTTTGGTGAACAGTGGGCGGCAAATTGATGCCGTTAACTTGGCTTTTGCATTTGGTCTTACAGAACAGTTTTCTCCCGTATCCTTACTGAAGTCTTACTTGAAGGATGCTAGAAAATCTTGCTCTCCTGTCAAAAGTGTTAACTCATCCCCCACTGCACAGATTGAGGTCAATGAACGAGAGCTGATTGCTCTTAAGGCTGTAATAAAGTGCATTGAAGAACATAAACTTGATGAGCAGTATCCTCTAGATCCTCTCATGAAACGAGTGGCTCAACTAGAGAAGGCCAAAGCTGACAAGAAGAGAGAAACTGAAGCAACAAAGCCTCAACCCAAGAGACCCCGTGCTAATGGTGTGGGATATGGTCCCCGTGTCACTAACATTCCTTCTGACAAAACTTCCTATGCTAGAGTTGCTGACAGGTACCCACAATATATGTATGACCGACCTTACATGTACCCTGGACCAACTGACAATCACTGCCCCCCTCTCCTGGGCACTGCAACATATAACCTCTCTCCTAGTCATGGCAACTACTTTGGAAATGGCTATCAGTACCAAGCTACATATCTTCACTAG 3249 0.4266 MEDTDSVTKLIDSTSSKIQQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTRKAREVLEKREAAVFAKEQASLQRLQDKRDAAVFAIVNAREKPRKVSSSVLAIISNGGQGTLDVKEKPVDVSIAAEGNLQDVKLSPENRNVELMSYPELVKLCKDMDAAGLHKFISDNRKNLAAVREEILNALRAAPNAACLVLDSLEGFYSMEVTSQDIKKDANLLGLRRTCIMLLECLSDFLTNSDCASNVISEDIKDRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLLASFGIATGFNEEELSRLIPTVSRRRQTADLCRCLGLSQKMPGVIEVLVNSWRQIDAVNLAFAFDLTEHFSPVPLLKSYLKDAKKASSPVKSVNSSPTAQIEVSERELIALKAVIKCIEEHKLDEQFPMDPLQKRVIQLEKAKADKKRETEATKPQPKRPRANGVGYGPRVTNIPSDKTSYARVADRYPQFVYDRPYMYPGPTDNHCAPFLGSATYNVPHNPGNYFGNGIFAMEKTDPVATLIDSTTSKIQQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTMKAREMLEKREAAVFAKEQASLQRLQEKRDAASFAIVNAREKYRKVSPKDLAVVSNGSQGTHVEEKPVDAVSNVTDGNLEDVKLSPGNGNVELMSYPELVKLCKEMDAAGLHKFISDNRKNLATIREEIPHALRAAPNAAHLVLDSLEGFYSMEVSSLDIKKDANLLGLRRTCIMLMECLSDFLTNSDCVSNLISEDIKDRAKAIAEGWKPRLDALDMDASNGNSLEAHAFLQLLASFGIASGFNEEELSRLIPVVSRRRQTADLCRCLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFGLTEQFSPVSLLKSYLKDARKSCSPVKSVNSSPTAQIEVNERELIALKAVIKCIEEHKLDEQYPLDPLMKRVAQLEKAKADKKRETEATKPQPKRPRANGVGYGPRVTNIPSDKTSYARVADRYPQYMYDRPYMYPGPTDNHCPPLLGTATYNLSPSHGNYFGNGYQYQATYLH. 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10325 1082 Coils Coil 632 652 - -
Seca4g10325 1082 Coils Coil 51 81 - -
Seca4g10325 1082 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 553 1007 - -
Seca4g10325 1082 Coils Coil 589 619 - -
Seca4g10325 1082 MobiDBLite consensus disorder prediction 985 1017 - -
Seca4g10325 1082 MobiDBLite consensus disorder prediction 985 1000 - -
Seca4g10325 1082 Pfam Frigida-like protein 167 456 IPR012474 -
Seca4g10325 1082 Pfam Frigida-like protein 705 994 IPR012474 -
Seca4g10325 1082 Coils Coil 973 993 - -
Seca4g10325 1082 MobiDBLite consensus disorder prediction 448 478 - -
Seca4g10325 1082 MobiDBLite consensus disorder prediction 448 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10325 Seca-Chr4 238717966 238738643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10325 - - aprc:113851605 956.436