Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10323 ATGTATGGCCTAATTGGTCAAGAGCATGAAGTAAACCACTATGATTTTCATATTGTCTACAGTCCTTCATATAGAGTTCCAGTGTTGTACTTTCGTTCATACCATAGTGATGGACAACCTTTGCCATTCAATGAAATTGAAAAGGACCTTCCTGGTCACTCTGCAAAGTTACTGTCAGAATCCAAATGGACATTTATAACTCAAGAGGAACACCCATATTTGAACAGGCCATGGTACAAACTACATCCATGTGGGACGAGTGACTGGATGAAGCTGCTCTTCCATGGTGATACATTGAATAAAAATAGTTTTGTTATTGAACATTATCTGGTTTCCTGGTTCTCGGTCATTGGACAAGTGATTGGTCTTAAAATTCCTTTGGGAATGCTGGATACTGTAGTTTCTAACGATTCTTAG 417 0.3861 MYGLIGQEHEVNHYDFHIVYSPSYRVPVLYFRSYHSDGQPLPFNEIEKDLPGHSAKLLSESKWTFITQEEHPYLNRPWYKLHPCGTSDWMKLLFHGDTLNKNSFVIEHYLVSWFSVIGQVIGLKIPLGMLDTVVSNDS. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10323 138 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 7 131 - -
Seca4g10323 138 Gene3D - 4 123 - -
Seca4g10323 138 Pfam Autophagocytosis associated protein, active-site domain 10 126 IPR007135 GO:0019787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10323 Seca-Chr4 238706975 238710203 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10323 K17888 - gmx:100808589 254.218