Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10298 ATGAGGAGGTTATCGGAGAATGACTGGTTGTGGAAGAGAAGAGGTGGAGAACGCAGACAAAGCCCAATTGCGTCTTCGGGCTTCGTTCTTGGTCTCATCGTCCTCGGGGGGACTGAAATTCTGGACGGAGGTCTTGTCGACGGGGAACTCATCGGAGCTAAAGGACTTGGCGATGAGGAGACAGAGCCTAAGATAGCGCAAGTGAGGAACAAGCAAGTGTTTCTAAGAGACTATGTGACTGGTTTTCCTAAGGAATCCGACATGAACATTGTTGAGAGTAGCATAACTCTCAAGGTTTCAGAAGGTTCCAATGATGTGTTACTAAAAAATCTCTACTTGTCATGCGATCCATACATGCGAGCCCTCATGAGCAAGATGGAAGGCCCTGAGGGATTACGTACCTATACTCCTGGTTCTGTGAGTCATTCTCTCTATGCCAATATATCCTTTATTTATTTTTCTTTTTTAAAATGCCCTACTCTTAAACAAGGGGAAGAGGCTCCAAAGGGTGGAAGGACTTTTTATAAAAGGTTCAAGAATTTCCATCAACTTACTCTTCAAGGGATTTGA 570 0.4439 MRRLSENDWLWKRRGGERRQSPIASSGFVLGLIVLGGTEILDGGLVDGELIGAKGLGDEETEPKIAQVRNKQVFLRDYVTGFPKESDMNIVESSITLKVSEGSNDVLLKNLYLSCDPYMRALMSKMEGPEGLRTYTPGSVSHSLYANISFIYFSFLKCPTLKQGEEAPKGGRTFYKRFKNFHQLTLQGI. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10298 189 Pfam N-terminal domain of oxidoreductase 71 128 IPR041694 -
Seca4g10298 189 SUPERFAMILY GroES-like 67 141 IPR011032 -
Seca4g10298 189 Gene3D - 65 146 - -
Seca4g10298 189 PANTHER PROSTAGLANDIN REDUCTASE 68 141 IPR045010 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10298 Seca-Chr4 238459708 238463085 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10298 K19825 - gmx:100809668 125.946