Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10289 ATGCCAGGCAGTGGCAGGTTTCTTATGTGGCTTGCTAAAAGAACTCCTAAAGTGAGAAATTATTTGGGATTGGAAATACGGCAAAGGCTAGTCAAGCGTGCTGAGTTATGGGTAAAGGATCTTGCTCTTGATAACATACATTTCTTGTTTGCAAATGCCACAATTTCGTTCAAGCAGTTGATAGAATCATATCCTGGTCCCTTGCAGTTAGTTTCAATTTTGGTGAGTCGCTCTACCTTCAGCAGGCTGATATCTAGGTTGTTTATTATTTTTTCAATACAAGGCCCCACTAGGTGA 297 0.4074 MPGSGRFLMWLAKRTPKVRNYLGLEIRQRLVKRAELWVKDLALDNIHFLFANATISFKQLIESYPGPLQLVSILVSRSTFSRLISRLFIIFSIQGPTR. 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10289 98 Gene3D Vaccinia Virus protein VP39 2 89 IPR029063 -
Seca4g10289 98 Pfam Putative methyltransferase 3 62 IPR003358 GO:0006400|GO:0008176
Seca4g10289 98 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 64 IPR029063 -
Seca4g10289 98 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 3 74 IPR003358 GO:0006400|GO:0008176
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10289 Seca-Chr4 238341684 238344408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10289 K03439 - gmx:100789050 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10289 4 238341684 238344408 Seca4g10289 4 238341684 238344408 ECH