Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10284 ATGGCTTCAAAGCCTGGAATCCTCACTGATTGGCCATGGAAGCCTCTTGGAAGCTTCAAGTATGTGGTACTAGCTCCTTGGGTGATTCACAGCACATATTCTGTGTTAGTGAAGGATGAGAGTGAAAGGGACATGTCGACATTCCTAACATTCCCATTTTTGCTTTGGCGTATGCTTCACAATCAGATATGGATCACTCTCTCTCGTTACAGAACTGCCAAAGGCAATAATAGAATTGTCGACAAGGGAATTGAATTTGATCAAGTTGATAGAGAAAGAAATTGGGATGACCAAATATTATTCAATGGGTTATTATATTACTTGGCAAGTTACACATTAGCTGGGGCATCACGTCTCCCACTATGGAGAACAGATGGTGTGGTAATGACAATATTGCTCCACATGGGACCTGTGGAGTTTCTGTATTACTGGTTGCACAGAGCACTTCATCACCACTTCCTCTATTCTAGATACCATTCTCACCACCACTCTTCCATTGTTACTGAACCCATTACTTCTGTGATCCATCCATTTGCTGAACACATATCATATTTCCTTCTCTTTGCAATTCCCAAATTAACCCTTGTCTTCACAAACACTGCCTCTTTGGTGGCCATGGTTGGATATGTCACTTACATTGATTTTATGAACAATATGGGTCACTGCAACTTTGAGGTCGTTCCAAAGTGGCTCTTTGATATCTTCCCACCTCTCAAGTATCTCATGTACACCCCATCGTTTCACTCTTTGCACCATACCCAGTTTAGGACAAACTACTCCCTTTTTATGCCATTTTATGACTACATCTATGGCACAATGGACAAGGCTTCAGATGAGTTACATGAGTCAGCATTAAAAAGAAAGGAAGAAACCCCAGATGTTGTGCACCTAACACATTTCACTACCCCTGAATCCATCTATCATCTCAGGCTTGGATTTGCTTACTTGGCCTCCAAGCCTTACACTTCAAAATGGTACCTTTGGTTGATGTGGCCTATCACTGCGTGGTCCATGATGCTCACATCGATCTATGGCCGTACATTCATTGTGGAGAGGAACCGTTTTGACAACCTCAAGCTGCAAACTTGGGCAATCCCCAAGTATAGTGTCCAATATTTTATGCAATGGCAAAAAGTGGCTATCAACAGAATGATTGAGGAAGCAATACTGGATGCAGACAGAAAAGGCATAAAAGTGGTGAGCCTTGGTCTCATGAATCAAGGGGAGGAGCTTAACATCTATGGAGGGCTATATGTTAGTAGACATCCAAAGTTAAGTGTTAAGGTTGTAGATGGTAGCAGCCTTGCAGTTGCTGTTGTTCTTAATACCATTCCTAAAGGAACAACTCAAGTATTACTTAGGGGAAAACTCACCAAGGTTGCTTATGCTATTGCCTTCACATTGTGCCAACAAGGCATTAAGGTCGCTACAATGTATGAGGATGATTATGTGAAGCTCAAAAAGTCATTCAATAGCTCTGAAACTAATTTGGACATTACTAAAAGTTACACTCAGACGGTAATATGA 1527 0.4152 MASKPGILTDWPWKPLGSFKYVVLAPWVIHSTYSVLVKDESERDMSTFLTFPFLLWRMLHNQIWITLSRYRTAKGNNRIVDKGIEFDQVDRERNWDDQILFNGLLYYLASYTLAGASRLPLWRTDGVVMTILLHMGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFAIPKLTLVFTNTASLVAMVGYVTYIDFMNNMGHCNFEVVPKWLFDIFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTMDKASDELHESALKRKEETPDVVHLTHFTTPESIYHLRLGFAYLASKPYTSKWYLWLMWPITAWSMMLTSIYGRTFIVERNRFDNLKLQTWAIPKYSVQYFMQWQKVAINRMIEEAILDADRKGIKVVSLGLMNQGEELNIYGGLYVSRHPKLSVKVVDGSSLAVAVVLNTIPKGTTQVLLRGKLTKVAYAIAFTLCQQGIKVATMYEDDYVKLKKSFNSSETNLDITKSYTQTVI. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10284 508 Pfam WAX2 C-terminal domain 451 505 IPR021940 -
Seca4g10284 508 PANTHER STEROL DESATURASE 13 497 - -
Seca4g10284 508 Pfam Fatty acid hydroxylase 133 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10284 Seca-Chr4 238226943 238234279 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10284 1 503 Lipid Metabolism Gene Families AT1G02190 59.843 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10284 K15404 - gmx:100818020 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10284 4 238226943 238234279 Seca4g10284 4 238226943 238234279 ECH