Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10283 ATGATAACTCCAACTTCTATTGAAAATGTCCATTCTTGTGAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGCATAGCTGGAATAGTGCACTGTTTAGAAGGATGGAATGAACATGAGTGTGGCTACACAATGCATAACATAGACAAAGTTTGGCATTCAGCTCTTCAACATGGCTTCCAACCTCTCACTCTACCTGTCACAAAATTAGCTCATTATAGTACTAATGAGTAG 237 0.4093 MITPTSIENVHSCEDWLPRRVMSAWRIAGIVHCLEGWNEHECGYTMHNIDKVWHSALQHGFQPLTLPVTKLAHYSTNE. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10283 78 PANTHER STEROL DESATURASE 2 63 - -
Seca4g10283 78 Pfam WAX2 C-terminal domain 1 63 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10283 Seca-Chr4 238226006 238226718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10283 1 67 Acyl Lipid Metabolism Gene Families AT1G02205 59.420 5.67e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10283 K15404 - gmx:100805835 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10283 4 238226006 238226718 Seca4g10283 4 238226006 238226718 ECH