Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10281 ATGCTACTGGGGAGATTCTCGATCTTTGGAGGTGGTGATTCCCGTTCGGTTAATAACAATTCGTCAAAGGGTGAAGAACTCCTTCCAACACTGAAGCTTGAAACGGATAGACAAGTTTATAGGCCTGGTGATCCTGTTATTGTCACCATCCAGATCTCCAATCCCTCAAATGAGTACTCATTTTTGATGGAAAGACTCAGCTTTGAGATCAAAGGCATTGAGAAATTGGACAATCAGTGGTTTGTCACACAGAAGCCTTTGCCCGGTTCAAAGCAAAGGAGAGGCGAACACGTTTTTTTAGACTCCTCAACACCAATCCTAGTTGCAAACCAGATTGTTAATGCTGGCGCCAGCAAATCATATGTGGTGCGAACGCTACTGCCTAGCATTATTCCACCATCATACAAGGGTTCAAACATTCGCTATTTGTACTATGTTAAAAGTGCAGTAACCGGAGGGTGGCTAATACTAGAAAATGGACAATCTCGTGCAGAGACCACAAATGACGTTACTGATTTGGAAGTTCGCATTCCATTACAAATATGGGTAAACCAGAAAGGCAGTGGCTTTCCAGTGGATGATGATATTGTTCCCTTAACTACTGTACAATTGGATATATTTTGGAAAGAGATGGATGGAGATGCTGATTGGGTTAGAGCAAATGATATTTATGATGGTCTTGAGGAGGGGTATGACAGCTCAAGGGATGACATCTCATCTGTTTCTTCATATAACCACTTGAAAGAAAATCTACACAGAGGCTTTGGAAGTTCACTATCATTACGATCTTCTTCTGCGAGATCATTGACCAGGGAAGCTTCTGCTTTTGAAGGTCACCGAGCAAGTTTATCGTCAAATATGGCACTTCCTCGGTTGTCTGTTGCGGAAGTATTATCTGATTCTGATGCTGATGTCTTGTCAACCCAGAAGTCATTTGCCGTTGTCTCCCCCAGTGAGCAACAGAAGTTCAGAAAGCCATTTTCTGCAGAAGATGATGCAGGAGTATCCTCTTCACCTGAAGCAGGAGCCGGTGAATCTTTATCATATTCTGCGTTAGTTAATTTTCTAAAAACATTTTCTGCAGCAGAAGGCTTCATTAGAGGAAGGTCTTATAACATCAGACTTGATGATCAAGTTTTACTTAAATTTTCCCCTAAAAATTCTGATTCAACTTATTATTTCAGTGATGTGATAGGTGGAACTCTTACTTTCTTTCATGAAGAAGGAGCTAGGAGATGTCTTGAGATCTCAATAACATTGGAAACTTCCGAAACTATAAATCGGCGATTTGTCCATCCTTCTAGAAGGAATTCCCCTACAATCACAAAGGTTCAGAGTGATCATCATGAGGTTGTTGCAGATTTGGTACAGACAAGCTTCCTTTTTTCTATTCCCATGGACGGTCCAATGTCCTTCTCTACTCCCCATGTATCTGTGCAATGGGTTCTCCGCTTTGAATTTTTCACAACCCCAAAGCATGTGGATTGGACAAAGTATGAGCATCCTCTTCTGATTGAGGGAAGGGAAAAAACTGAATGGGTTCTTCCAATCACTGTACATGCTCCGCCACCTAGAAATCCTGCTTCTGGCTCAAGAAATGAGAAACTTTTCTCTCTGGATCCTTTATGGGTGCACAATTGA 1641 0.4168 MLLGRFSIFGGGDSRSVNNNSSKGEELLPTLKLETDRQVYRPGDPVIVTIQISNPSNEYSFLMERLSFEIKGIEKLDNQWFVTQKPLPGSKQRRGEHVFLDSSTPILVANQIVNAGASKSYVVRTLLPSIIPPSYKGSNIRYLYYVKSAVTGGWLILENGQSRAETTNDVTDLEVRIPLQIWVNQKGSGFPVDDDIVPLTTVQLDIFWKEMDGDADWVRANDIYDGLEEGYDSSRDDISSVSSYNHLKENLHRGFGSSLSLRSSSARSLTREASAFEGHRASLSSNMALPRLSVAEVLSDSDADVLSTQKSFAVVSPSEQQKFRKPFSAEDDAGVSSSPEAGAGESLSYSALVNFLKTFSAAEGFIRGRSYNIRLDDQVLLKFSPKNSDSTYYFSDVIGGTLTFFHEEGARRCLEISITLETSETINRRFVHPSRRNSPTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTPHVSVQWVLRFEFFTTPKHVDWTKYEHPLLIEGREKTEWVLPITVHAPPPRNPASGSRNEKLFSLDPLWVHN. 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10281 546 SUPERFAMILY E set domains 30 154 IPR014756 -
Seca4g10281 546 PANTHER REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED 29 528 IPR014848 -
Seca4g10281 546 Pfam Rgp1 106 489 IPR014848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10281 Seca-Chr4 238123707 238138682 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10281 K20477 - gmx:100812423 888.256