Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10217 ATGCATCAAAAGAAATCTGAAGTTCAGATCGGAAAAGAAAGCACCGGCGTCTCTTCCGATTTTAACCCTACACCTCCTTCTTCAATTCACCAAAAACAAATCAAAAACTTCCTCTCTCAACCTCTTCCAATTCCCACACCACCCTCTTCTTCTTCCTCTGCTCCTTACAAAAGACCCTCTTCCCTCTCTAAATCCCCTACTCTTTACAAATTCTCCCAAACTAACCCTCGATTCTCGAAATCCACTCACTCTTCCTCCTTCTATTCACTCTCCCTCGCCGCACTCCGCCGTCTCCGCCTCCATCTCCGCCTCATCCTCCTCCTCTCGCTGCCGTTTTTCTACTTCCTAGTCTCACACCCTACCAATTCCTTCTTCCTCGACTTCCTCTCCGCCTTCGCCTTCTCCGCCGCGCTTCTCTTCTCTCTCAACCTCGCCGTCCCTCGCCTTCCCTCCATCCGCTTCAAGCTCAAGCCGCCGCCGTCTCTGCCGGTGGTGTGGACCGTCGGGTCGAGGCGGCGGGGGGAGAAGGCGGCGAAGGGTGACGTGGCGGGGTACGGAGTGAGGGTTTTCTCGAACGGGGACGTGTACGAGGGGGAGTTTTACGGGGGGAAGAGTGGGGGGAGTGGGGTGTATTATTACAGTATGAGTGGGAGGTATGAGGGGGATTGGGTGGATGGGAAGTATGATGGGTTTGGAGTGGAGACTTGGGCTAAAGGGAGCAGGTATAGAGGGCAGTATAGGCAAGGGTTAAGGCATGGGTTTGGGGTGTATAGGTTTTACACTGGGGATGTTTATGCTGGGGAATGGTCAAGTGGACAGAGTCATGGATGTGGAGTTCATACTTGTGATGATGGGAGTAGATATGTTGGGGAGTTCAAGTGGGGGGTTAAGCATGGCCTTGGACACTACCATTTTAGAAATGGGGACACATATGCGGGTGAATACTTTGCAGACAAGATGCATGGGTTTGGGGTATATTGTTTTGCAAATGGCCATCGCTATGAAGGATCTTGGCATGAGGGTAAAAGACAAGGGCTTGGGATGTACACATTTAGAAATGGGGAAACCCAATCTGGTCACTGGCAAAATGGAGTCCTGGACATTCCAAGCACACAAAATGCCACCTATCCAGTTTCTCCGGTTGGTGTCAATCATTCCAAAGTACTTAATGCAGTGCAGGAAGCAAGAAGAGCAGCTGAGAAGGCCTATGATGTAGCCAAGGTAGATGAAAGAGTGAATAGAGCAGTAGCAGCTGCTAATAGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTCAAAGCTGTGCAAAAACAAATGCATCATGATGTTAACAGTGAGAGCATCCCAATTCCCGTTGTGTGA 1359 0.5048 MHQKKSEVQIGKESTGVSSDFNPTPPSSIHQKQIKNFLSQPLPIPTPPSSSSSAPYKRPSSLSKSPTLYKFSQTNPRFSKSTHSSSFYSLSLAALRRLRLHLRLILLLSLPFFYFLVSHPTNSFFLDFLSAFAFSAALLFSLNLAVPRLPSIRFKLKPPPSLPVVWTVGSRRRGEKAAKGDVAGYGVRVFSNGDVYEGEFYGGKSGGSGVYYYSMSGRYEGDWVDGKYDGFGVETWAKGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWSSGQSHGCGVHTCDDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGVYCFANGHRYEGSWHEGKRQGLGMYTFRNGETQSGHWQNGVLDIPSTQNATYPVSPVGVNHSKVLNAVQEARRAAEKAYDVAKVDERVNRAVAAANRAANAARVAAVKAVQKQMHHDVNSESIPIPVV. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10217 452 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 317 362 - -
Seca4g10217 452 MobiDBLite consensus disorder prediction 53 67 - -
Seca4g10217 452 SMART morn 332 353 IPR003409 -
Seca4g10217 452 SMART morn 217 238 IPR003409 -
Seca4g10217 452 SMART morn 309 330 IPR003409 -
Seca4g10217 452 SMART morn 240 261 IPR003409 -
Seca4g10217 452 SMART morn 286 307 IPR003409 -
Seca4g10217 452 SMART morn 194 215 IPR003409 -
Seca4g10217 452 SMART morn 263 284 IPR003409 -
Seca4g10217 452 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 261 364 - -
Seca4g10217 452 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 225 270 - -
Seca4g10217 452 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 190 295 - -
Seca4g10217 452 Pfam MORN repeat 265 287 IPR003409 -
Seca4g10217 452 Pfam MORN repeat 311 333 IPR003409 -
Seca4g10217 452 Pfam MORN repeat 196 216 IPR003409 -
Seca4g10217 452 Pfam MORN repeat 219 241 IPR003409 -
Seca4g10217 452 Pfam MORN repeat 242 264 IPR003409 -
Seca4g10217 452 Pfam MORN repeat 184 195 IPR003409 -
Seca4g10217 452 Pfam MORN repeat 334 355 IPR003409 -
Seca4g10217 452 Pfam MORN repeat 288 310 IPR003409 -
Seca4g10217 452 MobiDBLite consensus disorder prediction 10 40 - -
Seca4g10217 452 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 62 407 - -
Seca4g10217 452 Gene3D - 178 225 - -
Seca4g10217 452 Gene3D - 226 270 - -
Seca4g10217 452 Gene3D - 271 317 - -
Seca4g10217 452 Gene3D - 318 381 - -
Seca4g10217 452 MobiDBLite consensus disorder prediction 1 67 - -
Seca4g10217 452 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 271 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10217 Seca-Chr4 236756211 236761926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10217 188 376 Acyl Lipid Metabolism Gene Families AT2G41210 36.508 1.50e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10217 - - gmx:100784010 586.645