Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10211 ATGGATAATCCTAATAAGCAAACACTTGGGAGTTTGGTAGTGGCAGCATTGCTCTTCATTGGGGTTATTTTTCTTTACAATTGGCCATCCTCTTTGTCCAGCGAATTAGTTCTATCCCAGAAAACACCACGGTGCCATCAACCAAATCTTACCAATGTTGAAGCATATGGAGATAGCCTTGACTCTGCTTTGGCCAAAGCTTCCATGGGAAATAAAACAGTGATAATTGCTATAGTAAATAAGGCTTATGCAGACCAAGATGTAAAAGGAGATACCACAATGCTTGATTTATTTCTCAGCAGCTTTTGGCTTGGGGAGGGAACCAAGTCTCTCATTGATCACCTTCTCATAGTGGCTGTTGATCGAACGGCCTATGATCGATGTCAGTTTCTACGGTTGAATTGTTACAAATTGGAAACAGATGGTGTTGATTTTGAAGGTGAGAAACTTTACATGTCTCAGGATTTCATCAAGATGATGTGGAGAAGGACTCTTTTCCTATTGCAAGTTCTCAAACGTGGCTACAACTTCGTTTTCACGGACACTGATATAATGTGGCTAAGAAACCCATTTATAAGGCTAAGCAAGAATGAGACAGAGGACCTCCAAATCAGCACAGACATGTACTTTGGTGATCCTTGGTCAGAAAAACATTTAATCAACACTGGATTTTACCTTGTAAGGTCGAACAACAAGACCATATCCTTATTTGAAGAGTGGTATGGCAAGAAAGACAATTCCACAGGTAAAAAAGAGCAGGATGTGCTTTTGGACCTCATTAGAAGTGGTATAATTGGACGCTTAGGACTTAAGGTTAGATTTTTGGACACCCTTTATTTTAGTGGATTTTGCCAAGACAGCAAAGATTTTAGGGCAGTTACCACCGTCCATGCCAACTGTTGTCGGAGCATCACCGCCAAAGTGGCGGATTTGAAGGTTGTCATCCGTGATTGGAAACAATTTAAGAGGTTAGAGGCTAATTCCACCATGAATACCACCATGGAAGCATATGGAGATAGCCTTGATTCTGCTTTGGCTAAAGCCTCCATAGGGGGAAACAAAACGGTGATAATTGCTATAGTAAATAAGGCCTATGTAAACCAAGATATAATAAAGGGAGACACCATGTTTGATCTATTTCTCAGCAGCTTTTGGCTTGGAGAGGGAACCAGGTCTCTTATTGATCATCTTCTCATAGTGGCTGTTGATCGAACGGCCTATGATCGGTGCCAGCTTCTTCGATTGAACTGTTACAAATTGGAAACAGATGGTGTTGATTTTGAAGGTGAGAAACTCTTTATGTCTCAACATTTCATCAAGATGATGTGGAGAAGGACTCTTTTCCTATTGCAAGTCCTCAAACGTGGCTATAGCTTTGTTTTCACGGACACTGATGTGATGTGGTTGAGAAACCCATTTACAAGGTTGAGCATGAATGAGTCAGAGGACCTCCAAATCAGCACAGACATGTACCTCGGTAATCCTTGGTCAGAAAAGAATTTAATCAACACGGGATTTTATCTTGTGAGGTCGAACAACAAGATCATCTCCTTGTTTGAAGAATGGTATAGCAAGAAAGACAGTTCCTCAGGAAAAAAAGAACAAGATGTTCTTCAAAGCCTTATTAGAAGTAGTATAATTGGACGCTTGGGACTTACAGTTAGGTTTTTGAACACCCTTTACTTTAGTGGATTTTGCCAAGATAGTAAAGATTTTAGGGCAGTCACCATTGTACACGCTAACTGTTGTCGGAGCATCACAGCTAAGGTGGCTGATCTAAAAGTTGCTCTCCGTGACTGGAAGCAATTTAGGAAGTTGGAGGCTAATTTTACAGTGAATCTCCAATGGACTGGGCATGATCATTGTTGGCAATCTTGGGGAAAACCAGACAAAAAGGTTGGTAAGCATAGCATCTCTTTTCTATGCTTCAAATAG 1935 0.4078 MDNPNKQTLGSLVVAALLFIGVIFLYNWPSSLSSELVLSQKTPRCHQPNLTNVEAYGDSLDSALAKASMGNKTVIIAIVNKAYADQDVKGDTTMLDLFLSSFWLGEGTKSLIDHLLIVAVDRTAYDRCQFLRLNCYKLETDGVDFEGEKLYMSQDFIKMMWRRTLFLLQVLKRGYNFVFTDTDIMWLRNPFIRLSKNETEDLQISTDMYFGDPWSEKHLINTGFYLVRSNNKTISLFEEWYGKKDNSTGKKEQDVLLDLIRSGIIGRLGLKVRFLDTLYFSGFCQDSKDFRAVTTVHANCCRSITAKVADLKVVIRDWKQFKRLEANSTMNTTMEAYGDSLDSALAKASIGGNKTVIIAIVNKAYVNQDIIKGDTMFDLFLSSFWLGEGTRSLIDHLLIVAVDRTAYDRCQLLRLNCYKLETDGVDFEGEKLFMSQHFIKMMWRRTLFLLQVLKRGYSFVFTDTDVMWLRNPFTRLSMNESEDLQISTDMYLGNPWSEKNLINTGFYLVRSNNKIISLFEEWYSKKDSSSGKKEQDVLQSLIRSSIIGRLGLTVRFLNTLYFSGFCQDSKDFRAVTIVHANCCRSITAKVADLKVALRDWKQFRKLEANFTVNLQWTGHDHCWQSWGKPDKKVGKHSISFLCFK. 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10211 644 PANTHER EXPRESSED PROTEIN-RELATED 14 330 IPR044821 -
Seca4g10211 644 Pfam Nucleotide-diphospho-sugar transferase 111 311 IPR005069 -
Seca4g10211 644 Pfam Nucleotide-diphospho-sugar transferase 393 593 IPR005069 -
Seca4g10211 644 SUPERFAMILY Nucleotide-diphospho-sugar transferases 403 579 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10211 Seca-Chr4 236578183 236596074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10211 - - pda:103710807 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10211 4 236578183 236596074 Seca4g10211 4 236578183 236596074 ECH