Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10202 ATGGCTTCCAATTCCAAATCAACGACGTTTCTGCAGCGTTACGGTTACGATTTGCTATTGGGATCAATCGCTGCATTCTACGTACTCATGGTGCCCTACACTAAGGTCGAAGAGAGTTTCAACGTTCAGGCAATGCACGATTTCCTTTATCACCGGCTTCACTTAGACAATTATGATCATCTGGAATTCCCTGGAGTGGTTCCTCGCACTTTCATTGGTGCTTTGCTTGTGTCACTTGTTGCAGCTCCGTTTGCATTAACTGCTAGTTTGCTGCATTTCCCAAAGTTTTATGCGCTTATCATAGTTCGGATGGCCCTTGGGTGCATCATCCTATATACACTAAGATTCTTTCGTCAAGAGATAAGAAATAAATTTGGGCATCAAGTAGAAGCCTTCTTTGTGATACTTACTTCCATTCAGTTTCATTTTCTGTTCTATTGTACTCGTCCACTTCCTAACATTCTTGCATTGGGTATAGTGAATTTGGCATATGGATTCTGGTTCCAGGGGCGATTTTATGCAGCTTTAAACACTCTGATTTTTGCTACAACTGTGTTCAGATGTGACATGCTGTTACTTCTTTGTCCCCTTGGGCTACAACTTCTTCTGACAAAAAAAATTTCACTGTGGGGTGCTCTAAAACACTGCACCGGAATGGCCTTCTTCTGCATCGGTCTCCTACATACAGGTCTAACTGTATTGGTTGATTCAATTATGTGGAAAAGGTTACTGTGGCCTGAATTTGAAGTCTTTTGGTTTAACTCTGTACTAAACAAGAGTTCTGAATGGGGAATACATGCTTTCCATTGGTACTTTACCTCAGCACTCCCTCGTTCACTGCTTGCTGCATATCCTCTTTCACTGTTTGGTCTCTTAGTAGACAGCAGGGTACGGTCTTTCACTTTCCCAGTACTTGCCTTCATTTTGCTTTATTCTAAGCTTCCCCACAAGGAGCTTCGTTTTATTATAAGTTCAGTTCCAATATTTAACTTGTCTGCTTCAATTGCATCTAACAGAATTTACAACAATAGGAAAAAGATGATTTGGAACTTGCTTTTCCTCATCATGTTGGGATCACTTTTAATAAGTCTTGGAGGTACCATTACAACTTTCCTGGCATCGTACTGGAACTATCCTAGTGGTCATGCCCTAAAAGAATTGCATAGGATTGGTTTTCATAGTCATACAGATGAACAATGGGTTCATATTGATACATTTTCAGCCATGAATGGGATATCTCGCTTTTGTGAAAGTGATTTCCCATGGAGGTATTCTAAAGAAGAACAAATTAGCTCACAAGAATTTCAGCAGAGAAATTTTACTTTTCTAATAAATGAACATCCTGTGATCAATGGATTTAAGTGTCTATTTACTGAAGATGGGTTCTCTAGAGTCCGCTTTAAATTTGGCTTTCCGCCAATTTTACTGGTTAAAGAGCCCAAAGTGTATGTCCATGGAAATTTAGAAAACAAGGATGTTATCAACAAAAATTGGCCCGGCTGCCCATAA 1509 0.3983 MASNSKSTTFLQRYGYDLLLGSIAAFYVLMVPYTKVEESFNVQAMHDFLYHRLHLDNYDHLEFPGVVPRTFIGALLVSLVAAPFALTASLLHFPKFYALIIVRMALGCIILYTLRFFRQEIRNKFGHQVEAFFVILTSIQFHFLFYCTRPLPNILALGIVNLAYGFWFQGRFYAALNTLIFATTVFRCDMLLLLCPLGLQLLLTKKISLWGALKHCTGMAFFCIGLLHTGLTVLVDSIMWKRLLWPEFEVFWFNSVLNKSSEWGIHAFHWYFTSALPRSLLAAYPLSLFGLLVDSRVRSFTFPVLAFILLYSKLPHKELRFIISSVPIFNLSASIASNRIYNNRKKMIWNLLFLIMLGSLLISLGGTITTFLASYWNYPSGHALKELHRIGFHSHTDEQWVHIDTFSAMNGISRFCESDFPWRYSKEEQISSQEFQQRNFTFLINEHPVINGFKCLFTEDGFSRVRFKFGFPPILLVKEPKVYVHGNLENKDVINKNWPGCP. 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10202 502 PANTHER GLYCOSYLTRANSFERASE 16 472 IPR005599 GO:0016757
Seca4g10202 502 Pfam Alg9-like mannosyltransferase family 31 364 IPR005599 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10202 Seca-Chr4 236503216 236529446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10202 224 328 Glycosyltransferase AT5G14850 31.429 3.26e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10202 K03847 - gmx:100776070 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10202 4 236503216 236529446 Seca4g10202 4 236503216 236529446 ECH