Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10199 ATGGCTGCAACCAGGACTCGAGCTAGTAGCTTTTCTCGCAATCTGTCAACTGTAACATCTCAGAATCCTGGACTCAAGCATGGCCCTAATGGGACAATGTTCATTTCTTCGGGGATTCCCGATCTGGACAAGATTTTAGGTGGTGGTTTTGCCCTGGGTAGCCTTGTCATGATTATGGAAGATGCAGAAGCACCTCATCATATGCTTCTATTGAGAAATTTTATGTCTCAAGGACTTGTACACAGACAGCCACTCTTGTATGCTAGTGCGTCTAGAGACCCTAAAGGATTTCTTGGTACTTTGCCTAGTCCAGGGTCATCCAAAGAGGATAAAACTCGGGATCTTAGCCATGAAAAGGATCTGAGAATTGCTTGGCAGTACAAGAAATACTTTGGGGAGCCTCAGCTAAATGCCAACTCTAATAATTGTGGTCAGCATGAGTACTGCAATGATTTTGACTTGCGCAAGCCCCTGGATAGGCAATTTTTCAGTGGCATGAATGTAGATTGTGTTAGCATCCAAGAGTCTTCAAACCTAGCTGCTCTTCAAGATCGTTGTGCTGGATATCTGGCTCAATTCTCAAGGTGTGATATTTTATTAAATTTATCTATAAGAATAGCTTTCTTTCTATTCAATTTTGCATTCACTTACATTATGGATGACATCAGCAGAAATGAAGGCGCCATTTCCTCTGCTGGTCGTATTGCAATTCAGTCATTTTGTTCTCCACAATGCAAATATGCAAACATGGAGTGGCATATGCTTTCCTTTATTAAGTCCCTAAAAGGCATGGCCCGATCTTCAAATGCTGTTGTTGTTGTAACATTTCCACCTTCACTTCTTTCTCCATCTTGTTCAAAAAGATTGCAACATATGGCAGACACCTTGCTTTCTGTCAGAGCAATTCCAGATGAGGACAAGGAACTGGCGAAACTTCTAACTGGTTACCAGGACATGGTTGGGCTTTTAAATGTACATAAAGTTGCACGGCTAAATACACAGGTTCCTGTGATTCTTGAGACCTCGACATTCTCAATAAAATTGCAAAAACGGAGGTTTTTGGTTTTAGAATGTCTAAACCAAGCCCCAGTTGATGGTTCAAGTGGAAGTTCGTATGGCACCTCTGGTGGCTGTTCTGGGTCAACTAAAGCTGGGCCACTTGATTTTTAG 1170 0.4205 MAATRTRASSFSRNLSTVTSQNPGLKHGPNGTMFISSGIPDLDKILGGGFALGSLVMIMEDAEAPHHMLLLRNFMSQGLVHRQPLLYASASRDPKGFLGTLPSPGSSKEDKTRDLSHEKDLRIAWQYKKYFGEPQLNANSNNCGQHEYCNDFDLRKPLDRQFFSGMNVDCVSIQESSNLAALQDRCAGYLAQFSRCDILLNLSIRIAFFLFNFAFTYIMDDISRNEGAISSAGRIAIQSFCSPQCKYANMEWHMLSFIKSLKGMARSSNAVVVVTFPPSLLSPSCSKRLQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHKVARLNTQVPVILETSTFSIKLQKRRFLVLECLNQAPVDGSSGSSYGTSGGCSGSTKAGPLDF. 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10199 389 PANTHER PAX6 NEIGHBOR PROTEIN PAXNEB 9 389 IPR008728 GO:0002098|GO:0033588
Seca4g10199 389 Pfam PAXNEB protein 19 389 IPR008728 GO:0002098|GO:0033588
Seca4g10199 389 Gene3D - 17 365 IPR027417 -
Seca4g10199 389 MobiDBLite consensus disorder prediction 1 27 - -
Seca4g10199 389 MobiDBLite consensus disorder prediction 366 389 - -
Seca4g10199 389 CDD Elp4 30 302 - -
Seca4g10199 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 305 IPR027417 -
Seca4g10199 389 MobiDBLite consensus disorder prediction 1 30 - -
Seca4g10199 389 MobiDBLite consensus disorder prediction 366 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10199 Seca-Chr4 236473472 236478943 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10199 K11375 - gmx:100799237 618.231