Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10198 ATGATGATAGTGGAGTATTTTCAGGAAGGGGCAGTGACAGTGTCAGCAAAACCAGTTAAGGCAATGGGGGAAACAGGGAAAATGTCTGCTAGTGATCCAAATTCTGCAATATACGTGACTGATTCTGCAAAAGATATAAAGAATAAGGTAAACAGGCATGCATTCTCTGGTGGACAAGATTCTATAGAGAAACATAGACAATTAGGGGCAAATCTCGAGGTAGATATACCAATCAAATACCTTTCTTTTTTCCTAGAAGATGATGCTGAACTTGAACACATCAAGAAGGAGTATGGATCTGGACGCATGCTAACTGGTGAGGTGAAGCAGCGCCTAATTCAAGTTTTGACTGAACTGGTGGAAAGACATCGTAGGGCTCGGGCTTCTGTAACTGAAGAGTTTGTTGATTCTCACCAAGAATTTGAGGATCTTGAAGCTTTTTTTGTGCTTTCTTGA 456 0.4079 MMIVEYFQEGAVTVSAKPVKAMGETGKMSASDPNSAIYVTDSAKDIKNKVNRHAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDAELEHIKKEYGSGRMLTGEVKQRLIQVLTELVERHRRARASVTEEFVDSHQEFEDLEAFFVLS. 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10198 151 SUPERFAMILY Nucleotidylyl transferase 23 137 - -
Seca4g10198 151 Gene3D - 29 148 - -
Seca4g10198 151 FunFam Tryptophan--tRNA ligase, cytoplasmic 32 148 - -
Seca4g10198 151 Pfam tRNA synthetases class I (W and Y) 23 119 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Seca4g10198 151 PANTHER TRYPTOPHANYL-TRNA SYNTHETASE 19 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10198 Seca-Chr4 236458764 236462366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10198 K01867 - gmx:100787194 219.164