Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10188 ATGGGGAGCGAAGAGGAGAATGGGGAATTCTACTTGAGATACTATGTAGGACACAAGGGGAAGTTTGGGCACGAGTTTCTGGAGTTCGAGTTCAGACCCGACGGCAAGCTCCGTTATGCCAACAACTCCAACTACAAAAATGACACCATCATTCGCAAGGAGGTTTACCTCACTCCTGCCGTTCTTCGCGAGTGCCGTCGTATCATTGCTGAAAGCGAGATCATGAAGGAAGATGATAACAACTGGCCTGAACCCGACCGAGTTGGGCGGCAGGAACTTGAGATTGTGATGGGGAATGAGCATATCTCTTTCACAACGTCGAAGATTGGTTCACTCGTGGATGTTCAGAGTAGTGCAGATCCTGAAGGGCTTCGCATCTTTTACTATCTTGTTCAGTTGATTGAAACAAGACACATTCCTGCAAGTATGGAATCACTCGTATATGCAGAATTCAGTGCCCTACCATGCGAAATGACCATCACAGGTCTGAAAATGCTTAAAAATTCAGCAAAAATACAAATTGAAGTTTAA 531 0.4539 MGSEEENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPAVLRECRRIIAESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQLIETRHIPASMESLVYAEFSALPCEMTITGLKMLKNSAKIQIEV. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10188 176 CDD Mago_nashi 9 132 IPR004023 GO:0008380|GO:0035145
Seca4g10188 176 SUPERFAMILY Mago nashi protein 9 134 IPR036605 GO:0005634
Seca4g10188 176 FunFam Protein mago nashi homolog 7 152 - -
Seca4g10188 176 PANTHER PROTEIN MAGO NASHI HOMOLOG 1 136 IPR004023 GO:0008380|GO:0035145
Seca4g10188 176 Pfam Mago nashi protein 10 134 IPR004023 GO:0008380|GO:0035145
Seca4g10188 176 Gene3D Mago nashi 7 148 IPR036605 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10188 Seca-Chr4 236204544 236209175 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10188 K12877 - gmx:100499908 273.092