Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10184 ATGACAATGGATGGAGCCAAGGGGTTGATTACAGCACCTGGACTTCTGGGAAAACATTCAAAGTTGGAGATAATTTGGGTGTTCAAATATGGCTCTCTCCACTCAGTGGATGAAGTTAATGAGAATGACTACAAAAGCTGCAGTTCAAGCAACTCCATAAAAAGCTATAGTGATGGAAACTCTAAGGTTCCATTGACAACAGCAGGCAAAATGTACTTCATATGCCCTACCCCAGGTCACTGTGGTGGAGGCATGAAGCTTGAAATCAATGTAGTTGCTGCTAGCACCACCCCAAGTGGCACCCCACCAACAACTCCAAGTGGCAGTCCACCAACCACCCCAAGTGGCAGTCCACCAACAACTCCAAGTGGCAGTCCACCAACCACCCCATCTTCTCCCTCTGAGTCAGGAACTCCACCACCACCAAAGCCTAGTGGAGCAGTCACTGTTTCAAGTGGCATCACCCTTTTGATGGGGTCTATCATTTTGGGTTTCATTATGGGCTAG 507 0.4793 MTMDGAKGLITAPGLLGKHSKLEIIWVFKYGSLHSVDEVNENDYKSCSSSNSIKSYSDGNSKVPLTTAGKMYFICPTPGHCGGGMKLEINVVAASTTPSGTPPTTPSGSPPTTPSGSPPTTPSGSPPTTPSSPSESGTPPPPKPSGAVTVSSGITLLMGSIILGFIMG. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10184 168 Pfam Plastocyanin-like domain 27 85 IPR003245 GO:0009055
Seca4g10184 168 ProSitePatterns Type-1 copper (blue) proteins signature. 69 85 IPR028871 -
Seca4g10184 168 MobiDBLite consensus disorder prediction 94 148 - -
Seca4g10184 168 PANTHER BLUE COPPER PROTEIN 26 107 IPR039391 GO:0009055
Seca4g10184 168 Gene3D - 16 92 IPR008972 -
Seca4g10184 168 ProSiteProfiles Phytocyanin domain profile. 1 93 IPR003245 GO:0009055
Seca4g10184 168 MobiDBLite consensus disorder prediction 103 146 - -
Seca4g10184 168 SUPERFAMILY Cupredoxins 26 91 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10184 Seca-Chr4 236141854 236143556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10184 27 133 Miscellaneous Gene Families AT2G32300 45.370 6.27e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10184 - - lang:109342480 123.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10184 4 236141854 236143556 Seca4g10184 4 236141854 236143556 ECH