Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10141 ATGGCACAAGCTATGGCATCAATGACTGGCTTACGTGGTTCCTCTCAGGCTGTGTTGGAAGGGAGCCTTCAACTGAGTGGCTCAACTCGCTTGAATTTGCAAAGTAACAACAGGGTCTCATCAACACGTTCAGGGCTCACTGTTAGAGCTCAACAAGTGCCTGCTGAGCCACAAAGTAGCCGCAGGGCAATGATTGGTGTTGTTGCTGCTGGTTTGGCCTCTGCTTCTTTTGTTCAAGCTGTTCTTGCTGAAGCTAAGTCCATCAAAGTTGGCCCTCCTCCCCCACCTTCTGGTGGACTGCCTGGAACACTGAACTCAGATGAAGCAAGAGACCTTAAGCTGCCATTGAAAGATAGGTTCTTCCTTCAACCATTGTCTCCTAGTGAGGCAGCACAAAGGGCAAAGGAGTCAGCCAAGGAGATTGTTGCTGTTAAGAAGTTTATAGACAAAAAGGCATGGCCATATGTTCAGAATGATCTGCGTCTGAGGGCTGAGTATCTTAGGTATGACCTTAACACTGTCATCTCTTCAAAGCCTAAGGATCAGAAGCAATCCCTCAAGGAACTCACTGGAAAGCTCTTCCAGGATATCAGCAATCTTGATTATGCAGCAAAAGTTAAGAGCACCCCACAAGCAGAGAAGTACTATGCTGAGGCTGTATCTACTCTGAATGATGTCCTTGCCAAACTTGGTTAA 696 0.4698 MAQAMASMTGLRGSSQAVLEGSLQLSGSTRLNLQSNNRVSSTRSGLTVRAQQVPAEPQSSRRAMIGVVAAGLASASFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLKLPLKDRFFLQPLSPSEAAQRAKESAKEIVAVKKFIDKKAWPYVQNDLRLRAEYLRYDLNTVISSKPKDQKQSLKELTGKLFQDISNLDYAAKVKSTPQAEKYYAEAVSTLNDVLAKLG. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10141 231 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 231 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Seca4g10141 231 MobiDBLite consensus disorder prediction 29 60 - -
Seca4g10141 231 Gene3D - 84 231 IPR023222 -
Seca4g10141 231 SUPERFAMILY Oxygen-evolving enhancer protein 3, 120 230 IPR023222 -
Seca4g10141 231 MobiDBLite consensus disorder prediction 29 58 - -
Seca4g10141 231 FunFam Oxygen-evolving enhancer protein 3 84 231 - -
Seca4g10141 231 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 35 231 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Seca4g10141 231 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10141 Seca-Chr4 235373212 235375281 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10141 K08901 - gmx:100306034 356.681