Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09660 ATGCAATCCAAAGATATGCATATAGATGATGTTGTAGATCACTTAAGAGGCCTTATAACTTATTTAAAAAATTATAGGGAAAACGGTTTTGCATCAGCATTAGAATCCACCAAAGAAATGGCTATTGGGATCGATGTAGAGTCCAAGTTCAATGAAAAAACGTGCCTGCTTCTAAGTCCTTCAACTTCATTACTTCACCATGTTCAAAACATCACTGATGCAGTTCATCATGCCAAGGTGCATGAAGGTGATGACTGGCATAGCACTGATTCTGTTAAACACTGGTCTTACACCGTAGATGGCAAGGTAACACAAGCTAAGGAGAAGATTGAAGCAATTGATGAACACAACAAGTCAATTACATTCATCCTGTTTGATGGAGATATTACTCAGCAATACAAGCTCTTCAACATCACTATACAAGTGATTGACAAGGAAGATGGTAATGCTGTTATTAAATGGACTGTTGAATATGAGAAGATCAATGAGGATGTTGCACCTCCATATGGCTATTTGGCCTACTTAACCAAGCTTACTAAGGATGCTGATGCTCATCTTCTCCAAACATAG 570 0.3807 MQSKDMHIDDVVDHLRGLITYLKNYRENGFASALESTKEMAIGIDVESKFNEKTCLLLSPSTSLLHHVQNITDAVHHAKVHEGDDWHSTDSVKHWSYTVDGKVTQAKEKIEAIDEHNKSITFILFDGDITQQYKLFNITIQVIDKEDGNAVIKWTVEYEKINEDVAPPYGYLAYLTKLTKDADAHLLQT. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09660 189 Gene3D - 31 188 IPR023393 -
Seca4g09660 189 CDD Bet_v1-like 66 187 - -
Seca4g09660 189 SMART Bet_v_1_2 37 189 IPR000916 GO:0006952
Seca4g09660 189 Pfam Pathogenesis-related protein Bet v 1 family 65 188 IPR000916 GO:0006952
Seca4g09660 189 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 65 188 - -
Seca4g09660 189 SUPERFAMILY Bet v1-like 106 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09660 Seca-Chr4 227241848 227246042 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09660 - - gmx:547541 181.415