Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09530 ATGGCGGTTGAGGTTGCGGGATTTGAGACGGTTCAAGGGCCACTAGAAAACAGTGCTGGAGGAGACAAATCTGTTTCGCATGAAAATGAAAATGGGAAATTGGAACAAGATCCAGGAGCTGCAAAACCCATAAAAACTGGGTCAGATGGAAATGAACCCGCTAAAGCAAAAGGGAATAATGTTTCAGATTCTACTGCCCCAAATGATGCTGTTGAAGAGTGGCCTGCGCCTAAGCAGATACATTCCTTTTATTTTGTCAGGTTTCGGCCTTATGATGATCCCAACATTAAATCTAAAATAGATAAGCTTGATAAAGAAATTAACCAGAAAAATCAAGCGCGGCTTCAGGTCACCGAAGCTCTAAGGGCGAAACGGTCAGAGCGAGCCGAGTTGATTTCTCAGATGAAGTCTCTAAGAGATGACAATAGGCAATTTCAAAGTATTGTGGATGAAAAAATAAAAGAGATCGAACCTCTGCAACAGGCCCTGGGCAAGCTGCGTACTGCAAACAATGCAGGCCGAGGTGGATTATGCTCATCTGAGGAGGAGCTTAATGACGTTATATATAGCTTACAATACCGCATACAACATGAAAGCATTCCGTTGGTTGAGGAAAAACAAATCCTTCGAGAAATCAAACAACTTGAGGGGACAAGGGAGAAGGTTATTGCTAATGCTGCCATGAGGGCTAAAGTACAAGACTCTATAGGGCAGAAAGATGCCATACAAGATCAGGTTAAGCTTATAGGTGGAGACTTGGATGGAGTGAAAAAAGATAGGCAAGTAATTCGGTCCAAAATCAAGCAACTTGATGATTCACTGAAAGCCATAGACAAGGATATCCAGTCTTTACAGGAAGATCTGGCAGCTGTAACTCAAAAGAGGGAAAAAGCTTATGAGAGCATTCAACAGCTAAGAAGACAACATGATGAGGGTAACACCTATTTCTTCCAAAGTCGTACAGTTTTGAACAAAGCGCGGGAGCTTGCTTCAAAGAAAGATATTAATGCTATTGAGGAACTTGCACAAACAGAGGTTGAGAAAATTATGTCACTCTGGAATAGTGACAAATCCTTTAGGGATGACTATGACAAAAGAATATTGTCATCATTAGATATTCGCCAGTTGAGTAGGGACGGACGGATGAGGAACCCAGATGAAAAGCCATTACTGGAAGAACCAAAACCTGCTGCTGAAACTGAAAAATTACCAAAAAATAGTGTAAAACAGCCAAAAGAGGAGCCTAAACCATCTCCACAAGAAACTGTGCCTGCTCAGAAGGTTCAAAAAGAAACCAAAAGCAAAGGAAGAGATGTCAAATCCAATCTAGACAAAAAGGATTTAGAAGATGTTGATGAATATGAATTTGAAAACCCACAAAAGGACACTCTTGTTAAAGAGCCTGCAATTGATCCAACTAAGTTGAAACAGATGAAAAGAGAAGAGGAAATGGCAAAAGCGAAGCTGGCCATGGAAAGGAAGAAGAAGCTAGCAGAGAAAGCTGCAGCCAAAGTAGCTATCAGAGCACAAAAGGAAGCTGAGAAGAAGCTTAAGGAACGCGAGAAGAAAGCAAAAAAGGTGGCTGGTGGCGCTGCAGATGTTCCGAATCCTGAGGAACTAGAAAATGAAGTGGTCGAGGCTGCAGAACAGGAGAAAGTCAATGATAACATCGAAGCCTCAACTCCAGTGAAGGAAAAGGCTCCAATGAAGACAAAAGTCGTAAAGGAGAACAACATTAGGTCCAGAAGCCGAACAAAGGGCCCTGAATCGATTCCAAAAGCTATCCTTAAGAGGAAGAAGTCTAACAATTACTGGGTATGGGTGGCTCCTTGTGCCTTGGTAGTTCTGATGTTGTTGGTGCTTGGATACAACCATTTTTTCTGA 1884 0.4204 MAVEVAGFETVQGPLENSAGGDKSVSHENENGKLEQDPGAAKPIKTGSDGNEPAKAKGNNVSDSTAPNDAVEEWPAPKQIHSFYFVRFRPYDDPNIKSKIDKLDKEINQKNQARLQVTEALRAKRSERAELISQMKSLRDDNRQFQSIVDEKIKEIEPLQQALGKLRTANNAGRGGLCSSEEELNDVIYSLQYRIQHESIPLVEEKQILREIKQLEGTREKVIANAAMRAKVQDSIGQKDAIQDQVKLIGGDLDGVKKDRQVIRSKIKQLDDSLKAIDKDIQSLQEDLAAVTQKREKAYESIQQLRRQHDEGNTYFFQSRTVLNKARELASKKDINAIEELAQTEVEKIMSLWNSDKSFRDDYDKRILSSLDIRQLSRDGRMRNPDEKPLLEEPKPAAETEKLPKNSVKQPKEEPKPSPQETVPAQKVQKETKSKGRDVKSNLDKKDLEDVDEYEFENPQKDTLVKEPAIDPTKLKQMKREEEMAKAKLAMERKKKLAEKAAAKVAIRAQKEAEKKLKEREKKAKKVAGGAADVPNPEELENEVVEAAEQEKVNDNIEASTPVKEKAPMKTKVVKENNIRSRSRTKGPESIPKAILKRKKSNNYWVWVAPCALVVLMLLVLGYNHFF. 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09530 627 MobiDBLite consensus disorder prediction 378 416 - -
Seca4g09530 627 MobiDBLite consensus disorder prediction 378 482 - -
Seca4g09530 627 MobiDBLite consensus disorder prediction 53 67 - -
Seca4g09530 627 MobiDBLite consensus disorder prediction 457 482 - -
Seca4g09530 627 MobiDBLite consensus disorder prediction 568 590 - -
Seca4g09530 627 MobiDBLite consensus disorder prediction 428 449 - -
Seca4g09530 627 MobiDBLite consensus disorder prediction 1 73 - -
Seca4g09530 627 Coils Coil 475 523 - -
Seca4g09530 627 MobiDBLite consensus disorder prediction 518 590 - -
Seca4g09530 627 SUPERFAMILY Tropomyosin 243 312 - -
Seca4g09530 627 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 3 610 - -
Seca4g09530 627 Coils Coil 100 141 - -
Seca4g09530 627 Coils Coil 267 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09530 Seca-Chr4 225049707 225055084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09530 - - gmx:100793229 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09530 4 225049707 225055084 Seca4g09530 4 225049707 225055084 ECH