Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09499 ATGAGGGGTCCTTTGGGTGCAGTAATAGGAAGGTATCCATCAAGTGATGGAGTTACCGAAATGGGTGGAATCATAAGGCATAACAGGAAATGCAGAGACATCACTGTTCTTGTGATCTTTATAGCTTTTTGGATAGCAATGATTGTAAACTCCAGCTTTGGTTTCAACCAGGGAAACCCACTAAGGCTCACTTATGGACTTGACTACAAAGGGAATGTGTGTGGGGACAAGCATGCAAACCCTGGTCTTCATAAATTGGAGCTCAGATATTGGCAAAATCCTAATCAGGTGTATCAGAGTGGATTGAAGGATAGCCAATTCAAACTGGTTGATGCCCGCAGTATATGCTTGTTGGACTGCCCTATACCTTCTGATGATTCTCTTAACTGGGTGTGTGATTATCCTGAAGGAGATATTCGTCTTTCAATGGACGATTGGATTAATAGGAACTATGATTATTTTGAGTTCCTTACGCCAGAAATGAGAAACTCCTCTCTTCAACTTCAGGGCCCATGTTATCCTGTCATATTTCCCAGTGTAAATGTTTATTGGAGTTGCCAATTTATTGCTCGGGCATCAAATACATCTCTGAAGCATTGGCAGCAGATGGGTGGAGTTAACATCAATGAAGACATTGTTATTGATAAGTCCATTCACAAGTCTATTAATTCTCGGTCAGCTGTCTTAAAGAGATACATGGCTGACATAGGAAAGGCATGGCCTGTGCTGATTGTTTGTGGAGGGATTTTACCTCTTTTTCTGTCTGTGATTTGGCTAATGATGATTCGGCATTTTGTTGCTGCAATGCCTTGGATAACAGTGGTCCTCTTCAATGTTCTAATAGTATCAGTCACAATGTTCTACTACCTAAAAGCTGGATGGATTGGAAATGATGCCATTTCTCCCATAATTGGTGAACATGACCCTTACATTAATGTATTTGGAAGGGAGCTAACTCATATACGTGCTATCACTGTACTTATGACCTTTATCATGGCTGTTGCCATTCTTACTTCAATTGCTATTGTTCGACGCATCCTTATGGCAACATCTGTCCTGAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCGAGCACTCATTCTTTTTCCACTCATTCCATATGGTATCCTTGCTGTGTTTTACATGTTCTGGATTTCAGCTGCTCTCCATTTGTTCAGCTCTGGCCAGATTGTTCAGAATAACTGCAACTCTAACTGCTGCACATATGACCTTGTGGCAAAACGGGTGAACTGTGATCGTTGTTGCGGGTATAGCATTCATTACACACCACATATTGGAGTTGCCATCCTTTTCCACCTATTTGGGTGCTATTGGGCTACACAATTTTTCATAGCGTGCTCCTCAACAGTGATTGCTGGTTCTGTTGCCTCTTATTACTGGGCCCATGGTGAAACATCTCAAGAAATTCCATTTCTTTCAGTCTTTTCCTCCATGAAGAGGCTTATGCGTTACAGTCTTGGATCTGTGGCTCTTGGCTCTCTGATTGTGTCATTTGTAGAATCAATCCGCTTTCTGCTTGAGTCAATTCGTCGCAAACTAAAAGTCTCTAGTCATGGGCATGACAGTTGCATAGGCAAGGCTGCATACCAATCATCTCAATGTTTCCTCAGGTGTATTGAGTGGACCATCAAATCAGTAAATCGAAATGCTTACATCATGATTGCTATAACAGGAAAAAGTTTCTTTAGTGCATCTTCTATTGCAACAGAATTGATCATGAATAACATTCTAAAGATTGGGCGTCTTAATGTGATTGGAGATGTCATTTTGTTCCTTGGAAAACTCTGTGTCAGCCTCTCAAGTGCTTTGTTTGCATTCCTCATGTTGGACACACACAAGTACAATTCTGGCCATAACAAGACCTCATCTCCACTCTTTCCTGTCGTGGTTTGCTGGGCTCTTGGATATATTGTTGCAACTCTTTTCTTTGCAGTTGTGGAGATGTCAATTGATACCATAGTTCTCTCATTCTGCCAGGATTCTGAAGAACACCAAGGCACAGCCCAATATGCTCCACCCCTTCTCATTGAAACTCTCGGTGACCAAAATGAGATGCAGAGACTTACACAAGGACCCCAATGA 2103 0.417 MRGPLGAVIGRYPSSDGVTEMGGIIRHNRKCRDITVLVIFIAFWIAMIVNSSFGFNQGNPLRLTYGLDYKGNVCGDKHANPGLHKLELRYWQNPNQVYQSGLKDSQFKLVDARSICLLDCPIPSDDSLNWVCDYPEGDIRLSMDDWINRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNTSLKHWQQMGGVNINEDIVIDKSIHKSINSRSAVLKRYMADIGKAWPVLIVCGGILPLFLSVIWLMMIRHFVAAMPWITVVLFNVLIVSVTMFYYLKAGWIGNDAISPIIGEHDPYINVFGRELTHIRAITVLMTFIMAVAILTSIAIVRRILMATSVLKVAAKVIGEVRALILFPLIPYGILAVFYMFWISAALHLFSSGQIVQNNCNSNCCTYDLVAKRVNCDRCCGYSIHYTPHIGVAILFHLFGCYWATQFFIACSSTVIAGSVASYYWAHGETSQEIPFLSVFSSMKRLMRYSLGSVALGSLIVSFVESIRFLLESIRRKLKVSSHGHDSCIGKAAYQSSQCFLRCIEWTIKSVNRNAYIMIAITGKSFFSASSIATELIMNNILKIGRLNVIGDVILFLGKLCVSLSSALFAFLMLDTHKYNSGHNKTSSPLFPVVVCWALGYIVATLFFAVVEMSIDTIVLSFCQDSEEHQGTAQYAPPLLIETLGDQNEMQRLTQGPQ. 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09499 700 Pfam Plasma-membrane choline transporter 327 669 IPR007603 GO:0022857|GO:0055085
Seca4g09499 700 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 22 697 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09499 Seca-Chr4 224563733 224571551 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09499 K15377 - gmx:100803501 1348.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09499 4 224563733 224571551 Seca4g09499 4 224563733 224571551 ECH