Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09485 ATGGCTTCCAAGCTGTTACTGATCACTGTCTTCATTTTTGACTTAATTGCTTTTGCATTGGCTGTGGCTGCAGAGCAGAGAAGAAGCACTGCCAAGATTGTACCAGACAGGGAAATCAATTATAATTACTGTGTCTATGACTCTGATATATCAACTGGCCTTGGTGTTGGTGCTTTTCTGTTCCTTTTGGCTAGTCAAGTCCTCATAATGGTGGCAAGCCGTTGCTTCTGTTGTGGGAAGCCTCTAAACCCAGGAGGTTCAAGGGCCTTGGCTATAGTCCTTTTCATAATCTGCTGGGTGTTTTTCTTCATAGCGGAGGTGTGCTTGTTGGCTGGTTCAGTGAGAAATGCCTACCACACTAAGTACAGAACAATGTTCACTGAAACTCCCCCTTCTTGCCAGACAGTTAGGAAAGGAGTTTTTGGTGCTGGTGCTGCTTTTGTATTATTTAGTGGCATAGTTTCTGAGTTCTACTATATCAACTATTCAAGGGCCAAGGAAAGCTTCCAACCAGGTGGGACTGGTATTGGTATGGGAACCTACAAATGA 549 0.4408 MASKLLLITVFIFDLIAFALAVAAEQRRSTAKIVPDREINYNYCVYDSDISTGLGVGAFLFLLASQVLIMVASRCFCCGKPLNPGGSRALAIVLFIICWVFFFIAEVCLLAGSVRNAYHTKYRTMFTETPPSCQTVRKGVFGAGAAFVLFSGIVSEFYYINYSRAKESFQPGGTGIGMGTYK. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09485 182 Pfam Protein of unknown function (DUF1218) 58 152 IPR009606 -
Seca4g09485 182 PANTHER OS07G0462200 PROTEIN-RELATED 8 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09485 Seca-Chr4 224413800 224415228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09485 - - gmx:100499677 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09485 4 224413800 224415228 Seca4g09485 4 224413800 224415228 ECH