Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09461 ATGGTAAAGGAATTCAACACCCAAGCAAGGGTCGGTGTGGGGCTGGAAACCCTCTGGCCAGCTCTGTCCAAGGATTTCAGTTTCATAGTTCCAAAGGTTATCCCTAATATTGTGAAAGATGTGCAAGTGATCGAAGGTGATGGAGGGGTTGGTACAATCCTCATTTTTAATTTCTGGCCCGGTGTATCCTCATCAGGAAGTTACCAGAGGGAGAAGATCACAGAGCTTGATGAGTTCTCCCATGAAATTGGGCTCCAAGTGATTGAAGGAGGCTATCTAAATCAAGGGTTGTCGTACTACAAGACAACTTATCAACTATCTGCAATAGGTGAGCATCAGACTCTGGTCAATGTGAAGATCTCTTATGACCATGAATCTGACATAGAAGAAAGAACCAAACCAACGAAGACATCAGAGTCCACTTTATTCTATGTTCGGTGCCTAGAAAAATATTTGTTGAATGGCGCTTGA 471 0.4331 MVKEFNTQARVGVGLETLWPALSKDFSFIVPKVIPNIVKDVQVIEGDGGVGTILIFNFWPGVSSSGSYQREKITELDEFSHEIGLQVIEGGYLNQGLSYYKTTYQLSAIGEHQTLVNVKISYDHESDIEERTKPTKTSESTLFYVRCLEKYLLNGA. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09461 156 Gene3D - 1 156 IPR023393 -
Seca4g09461 156 CDD Bet_v1-like 3 152 - -
Seca4g09461 156 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09461 156 PRINTS Major pollen allergen Bet V1 signature 86 99 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09461 156 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09461 156 PRINTS Major pollen allergen Bet V1 signature 25 35 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Seca4g09461 156 FunFam Phytohormone-binding protein CSBP 1 156 - -
Seca4g09461 156 Pfam Pathogenesis-related protein Bet v 1 family 21 154 IPR000916 GO:0006952
Seca4g09461 156 PANTHER - 5 154 - -
Seca4g09461 156 SUPERFAMILY Bet v1-like 5 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09461 Seca-Chr4 224102124 224102804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09461 - - gmx:100808820 241.506