Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09335 ATGAACATGTCTGACATAATTTCTTGTTTTAGCGAGAACGCAGTGAATGTGTCACATTCTTCATGTTCTAGCTATTCAAACAATGCTTGTATATCTCCAAGCTTTACACCTTCAATCCAAAATTCAGTCTCTTCTGTCTACAAAACAATCCTCTCCAACCAAAACCAGCTTTTGATCACTGTCACTTGGTGTAAGAGTCATTCCAATCAAGGACTCACCATAAGCTTTGGTGATGAAGATCCAGCAGCAGCAACTTTCAGACTCAACACAAATTCAAGGTTTTTCAGGAAGAAGAAAGGAAACAAGTTGTTGGAATTATCTGATGAGTCAAAAGTTGAAGTCTTTTGGGATCTTTCCAATGCTAAGTATGACACTGGCCCTGAACCTGTTGATGGGTTTTATGTTGCAATCCTTGTGGATGCAGAAATAGTCCTGATTCTTGGTGACATGGCTGAAGAAGCATTGACCAAGAAGCTCAAAAGTAGAACCCTTTTGGCTAAAGTGTCATTGTTATCAAGAAGAGAGCATTGTTCAGGAAACACCCTTTACACAACCAAGGCTCAGTTCTGTGACACTGGTAATTGGCATGACATTTTGATTAGATGCAGTGGTGAAAGTGAGGGATTCAAGTATCCTGTTTTGTCTGTTTGTATTGATAAGAAGACAGTGATTCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGCAATCAAACAATTTTTGTTGATGGGTTGCTGGTTGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACAACCCTGCTTCTTCTGGGTATGCAGTGTTCATGTTCAGGACTAGGAGTGGTTTGGATAGCAGATTGTGGTTAGAGGAGAAATCAGCAATGAAAGATAAAGACAGAGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGAGCACATAA 921 0.3996 MNMSDIISCFSENAVNVSHSSCSSYSNNACISPSFTPSIQNSVSSVYKTILSNQNQLLITVTWCKSHSNQGLTISFGDEDPAAATFRLNTNSRFFRKKKGNKLLELSDESKVEVFWDLSNAKYDTGPEPVDGFYVAILVDAEIVLILGDMAEEALTKKLKSRTLLAKVSLLSRREHCSGNTLYTTKAQFCDTGNWHDILIRCSGESEGFKYPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNNPASSGYAVFMFRTRSGLDSRLWLEEKSAMKDKDRVEFSLLIYACKST. 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09335 306 Pfam Plant protein of unknown function (DUF868) 39 304 IPR008586 -
Seca4g09335 306 PANTHER EXPRESSED PROTEIN 6 304 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09335 Seca-Chr4 221412941 221414599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09335 3 305 EF-hand Containing Proteins AT5G28150 40.000 4.06e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09335 - - gmx:100798692 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09335 4 221412941 221414599 Seca4g09335 4 221412941 221414599 ECH
Seca4g09335 4 221412941 221414599 Seca4g04374 4 79986212 79987120 PCT