Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09274 ATGGAGAAGCTTTGCGTTTTTGTGGCCACTCTTGTATTCCTTGGTATGCTATTTCATGATGGGACGGTAATTGCTTTGAGGAATGAAGACGGATCAGAGGAATGGGGATATGTACAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTTTACAGAAGTCCCCACAGAGTGGAGAACCCCTCCAAGCCATGGCCAATCATTCTCTGGCTACAAGGAGGACCTGGCTCTTCTGGAGTTGGGTTTGGAAATTTTAGAGAGATTGGTCCTATGGATGCTAATTTGAAGCCAAGGAGTTTCACATGGTTGAGAAAAGCAGACCTGCTGTTTGTGGACAATCCAGTTGGATCAGGGTACAGTTTTGTGGAGGATTCTAGACTCTTTGTCAAGACAGATGAGGAAGCAGCCACTGACTTGACTACATTATTAATTCAGCTATTCAACCATAATCCCAGCCTTCAAAAGAATCATCTGTTCATTGTGGGAGAGTCTTATGGTGGCAAATTTGCTGTCACTCTTGGATTATCAGCTGTAAAAGCAATTAGAAAAGGAACATTGAAGCTCAAACTTGGAGGTGTGGTATTAGGAGACAGCTGGATCTCTCCTGAAGATTTTGTGTTCTCGTGGGGTCCTCTGCTTAAGGACCTCTCAAGACTTGACGACAATGGATTGCAAAAATCAAAGAGTATGGCTGAGAGGATCAAGGAGCAACTTGAAGCTGGTCAATTTGTAAATGCAACTGAAACATGGAGTGAACTTGAATCTCTAATTAGCTTTAGTAGCAACTCTGTGGATTTCTATAATTTTCTGCTGGATTCTGGTAATGATCCAGCAACCTTATCCTCAATGAAGATGAGATTGTTCAAAGAAATATCAATGAGGCGGTACTCCAAGTATCTTTCTTCAACGAGATATTCTCCTGGTGTTGAGGGTGATTTGAACAGCTTATTAAATGGTGTCATAAAGAAGAAGTTAAAGATCATTCCTAAGAATGTTAAATGGTTTGAGCAGTCTGATTATGTTTTTACAAGTCTTGAAGGTGATTTTATGAAGCCAAGAATTGCTGAGGTTGATGAGCTGCTGGATCTTGGGGTCAATTTGACTGTGTACAGCGGACAAGTTGATCTCATTTGTGCAACAAAGGGAACTGAAGTTTGGCTCAAGAAACTCAAATGGCAAGGCCTTCCAAACTTCTTGGGGAAAGATAGAGCTCCCATCTATTGTGGAAGTGACAAAACGACCAAAGGCTTTTTTAAGTCATATAAGAACCTAAACTTCTATTGGATCCTGGGAGCCGGCCATTTTGTAAGTCAAGATCAACCATTGTCTCATTAG 1332 0.4167 MEKLCVFVATLVFLGMLFHDGTVIALRNEDGSEEWGYVQVRPKAHMFWWLYRSPHRVENPSKPWPIILWLQGGPGSSGVGFGNFREIGPMDANLKPRSFTWLRKADLLFVDNPVGSGYSFVEDSRLFVKTDEEAATDLTTLLIQLFNHNPSLQKNHLFIVGESYGGKFAVTLGLSAVKAIRKGTLKLKLGGVVLGDSWISPEDFVFSWGPLLKDLSRLDDNGLQKSKSMAERIKEQLEAGQFVNATETWSELESLISFSSNSVDFYNFLLDSGNDPATLSSMKMRLFKEISMRRYSKYLSSTRYSPGVEGDLNSLLNGVIKKKLKIIPKNVKWFEQSDYVFTSLEGDFMKPRIAEVDELLDLGVNLTVYSGQVDLICATKGTEVWLKKLKWQGLPNFLGKDRAPIYCGSDKTTKGFFKSYKNLNFYWILGAGHFVSQDQPLSH. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09274 443 Pfam Serine carboxypeptidase 31 440 IPR001563 GO:0004185|GO:0006508
Seca4g09274 443 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 440 IPR001563 GO:0004185|GO:0006508
Seca4g09274 443 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Seca4g09274 443 FunFam Carboxypeptidase 18 443 - -
Seca4g09274 443 SUPERFAMILY alpha/beta-Hydrolases 32 441 IPR029058 -
Seca4g09274 443 Gene3D alpha/beta hydrolase 20 442 IPR029058 -
Seca4g09274 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Seca4g09274 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Seca4g09274 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Seca4g09274 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09274 Seca-Chr4 220112000 220115332 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09274 K09646 - gmx:100796322 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09274 4 220112000 220115332 Seca4g09274 4 220112000 220115332 ECH