Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09241 ATGTCAGAACTGCCCTTTCTTCAGGCTCCTTGGAATCTTAAGTGGACTCTAATTGATGAATGCACACTGTTAGTGGTTGGCTTCAATTCCAAGATGAATAATTCATACGCTGAAAATCATAATGAAGCTACTACTGTCGCGGGATTTGAAGTTCCAAAGTCACCTGATTCCGGTTACAATAATGTATACCCTGGAAATGAAGATGAGGCACGTGATCCACCTATGGTCCCTCCACATTTGCAACACAGTTTACTCGGCTGTCCTTCTCAAATAGACGCTTCAGGATCTCTTCCATTGCCTCAGACGAATGTGATTCTAAATCATCTCTATATTGAGAACAGAGAGCCCCAAAGGTCTGTGGTGGCTTTGGGATACACTCATCGCTTTCGATCTAAATATGTTACCGTTGTGCTCTACAAACCAGTTCAGAGAAGGGGAAGCGCTAGTATTTGA 453 0.4305 MSELPFLQAPWNLKWTLIDECTLLVVGFNSKMNNSYAENHNEATTVAGFEVPKSPDSGYNNVYPGNEDEARDPPMVPPHLQHSLLGCPSQIDASGSLPLPQTNVILNHLYIENREPQRSVVALGYTHRFRSKYVTVVLYKPVQRRGSASI. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09241 150 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 70 141 IPR006828 GO:0005515
Seca4g09241 150 SMART AMPKBI_2 52 142 IPR006828 GO:0005515
Seca4g09241 150 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 31 144 IPR043554 -
Seca4g09241 150 SUPERFAMILY AMPKBI-like 43 142 IPR037256 -
Seca4g09241 150 Gene3D - 31 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09241 Seca-Chr4 219405520 219407707 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09241 - - pcin:129315009 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09241 4 219405520 219407707 Seca4g09241 4 219405520 219407707 ECH