Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09238 ATGGCTGAGGTGGGGAAAATATTGTACATGGTGGTGGTGGACGAAGCTGAGAAGAAGGACAAGGGGAAAGAGTCATTTCGGTATACGCGTTCTGTTCTGCAGAGCACGTTGCAGCTCATGGGATGTAAAGCGCGACATGCCTTTAAGATCAGCCAAAGAGTTTTTGAACTCACAAGGAATGGGATCTCTACTGATGCCTTGCAGCCTGATGGAATGGTTTTATCAGGTCTCAATGCTCTTAGCGGAAATGTTGTGAAAAAAGATTGTCATGAAGCTACTGTTTGCCTGGGTAAAACAGACTTTGGCGACCATTTACTTGTAGAGAAAGATTATAGAAGTAAGAGTGTACCATTTGAGTTGTACAAAAGGCTTACAACTGCATTTGTTCCAAGAGAAACTTTTCTAGATATTGTCTGTGATGCTCTGGCTGAATACAAGTATGTGGGTCCCAACCAGAGAGAAGACTTGATGCTAGCCTGCAGGATTCGAGAACGTAAGGAATCTGTGACAGTGCTGTTGTGTGGCACTAGTGGCTGTGGCAAATCCACGTTGTCTGCATTGCTGTTCAATAACTTCAGTACTATTTATATCTTCATGACTTCATTTCAGGGTAGTCGGTTGGGAATCACAACAGTGGTGTCAACCGATTCTATTAGGCACATGATGAGAAGTTTTGCTAATGAGAAGGAAAACCCCTTGTTATGGGCCTCTACCTACCATGCAGGCGAGTGTTTGGATGCTGTTGCTGTTGCAGAAGCAAAGGCCCGAAGGAAAGCAAAAAAACTGGCTGGTGTGTCACATTTGCTTCCCAAGGATGAAGTAACTGAGGGCCATAATCCAAGGAAATCTGATATACGGATGTTGGAGGCAGGCTCTGGTGCTACTGAACTGCTAAATGCAAAACAAATGGCTGTTCAAGGATTTAAAGCACAGAGTGAGATGGTGATTGACAGTCTTGATAGGCTAATCACTGCATGGGAAGAACGAAAAGAATCTGTTGTTGTTGAGGGTGTTCACTTGAGTCTCAACTTTGTTATGGGGCTTATGAAGAAACATCCTTCAATCATACCATTCATGATATACATTACAAATGAGGACAAACACATGGAACGTTTTGCTGTACGGGCAAAGTATATGACCCTGGACCCAGCTAAAAACAAATATGTAAAGTATATCCGTAACATCAGAACAATCCAGGATTATCTCTGTAAGCGGGCTGAGAAACATTTAGTTCCCAAAATAAACAATACAAATGTTGACAAGAGTGTAGCAGCCATCCATGCTACTGTCTTCGGATGTCTTCGTAGGTGTGAATCTGGGGAACAGCTATATGATCCTATTAGAAATACTGTAACTGTTGTTGATGAGGAATATAGAAATCAATGTGTGGCCAATTCTTTGAGCTCTAAAGGAATGTTTCAATTGATCCAGAGAAAAGGTTCTTCAAGGCATCTTATGGCTCTTGTAAATACTGATGGGTCTGTGGCAAAGGCTTGGCCTGTTAATACAGTGGACAGTAATGGGAAGCCTATATGGTGCCTTGGACCAGAGAATGGAATTGGGGATCCGTTGTATGGACCCTTGCGCATTGGTAAGGCAGAACATATAAATCTTCAGTTTGGTTTGTATGGGATCAGTGCTTTGCCCAGTGATGGTGGCACTAGTCATGCTGGAAGCGTTGATGAGTCAAAAGCTGATGGGACTGATACGGGCAGTAGATATGTATCGTCCTGCTGTAGTTCACCAAGGCTGTCTGATGGACCTGCAAAGGAGCTCAAGGAGGAGCTTTCAGTGCATGGTAGTGATGAAGAGATTGATGATCAACTAGAGGTGGGCAGTGATGATGATTTCAGTGACGATGGTGACAAACATATCCATGAGGAGGTAGGCTCAGTTGATGAGGAATCTACTAAGTCTGACGAAGAGTATGATGATCTGGCAATGCTAGATATGAGGGAAAATGGATATTGGTCGGATGATGATAAGTGTAGGAGTAAGGATGCTGCTGTTCCTGGGGACCTAGGTACTAAAATGCAAAGGAATAAGTATCGTCAAAACCTGGATCTCTTCCTTAGAACTAGAAGTGAGCCAGTGCCAGAGCCCTTGTGCTCATATTCCTCTCTGCTTATGGAAAAGAGTGAAAGGAGACTATCACCATCTGGCAAAGCCAAATTGAGAAAACGCTCTCTTAGCATTCCGGCTTTGGGAAAGGGTAGTTCCGCAATCCAAGATCCCATTCTTTCTGGTGCTCCTCAAAGGTAA 2262 0.435 MAEVGKILYMVVVDEAEKKDKGKESFRYTRSVLQSTLQLMGCKARHAFKISQRVFELTRNGISTDALQPDGMVLSGLNALSGNVVKKDCHEATVCLGKTDFGDHLLVEKDYRSKSVPFELYKRLTTAFVPRETFLDIVCDALAEYKYVGPNQREDLMLACRIRERKESVTVLLCGTSGCGKSTLSALLFNNFSTIYIFMTSFQGSRLGITTVVSTDSIRHMMRSFANEKENPLLWASTYHAGECLDAVAVAEAKARRKAKKLAGVSHLLPKDEVTEGHNPRKSDIRMLEAGSGATELLNAKQMAVQGFKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRAEKHLVPKINNTNVDKSVAAIHATVFGCLRRCESGEQLYDPIRNTVTVVDEEYRNQCVANSLSSKGMFQLIQRKGSSRHLMALVNTDGSVAKAWPVNTVDSNGKPIWCLGPENGIGDPLYGPLRIGKAEHINLQFGLYGISALPSDGGTSHAGSVDESKADGTDTGSRYVSSCCSSPRLSDGPAKELKEELSVHGSDEEIDDQLEVGSDDDFSDDGDKHIHEEVGSVDEESTKSDEEYDDLAMLDMRENGYWSDDDKCRSKDAAVPGDLGTKMQRNKYRQNLDLFLRTRSEPVPEPLCSYSSLLMEKSERRLSPSGKAKLRKRSLSIPALGKGSSAIQDPILSGAPQR. 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09238 753 MobiDBLite consensus disorder prediction 551 623 - -
Seca4g09238 753 MobiDBLite consensus disorder prediction 714 753 - -
Seca4g09238 753 Gene3D - 165 436 IPR027417 -
Seca4g09238 753 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 5 658 - -
Seca4g09238 753 MobiDBLite consensus disorder prediction 569 583 - -
Seca4g09238 753 MobiDBLite consensus disorder prediction 587 606 - -
Seca4g09238 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09238 Seca-Chr4 219286555 219292505 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09238 - - gmx:100776549 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09238 4 219286555 219292505 Seca4g09238 4 219286555 219292505 ECH