Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09151 ATGCAACGGCGGTCAGGGAATGTATTGCCTCCTCCATTGGATGATTGTGCAAACAATTCTTCAGGGAAACCCATTGTGAAAAATGCTTCAAGTGTAGGATCTCTTTTTCATGCTTCCTTTAACTCCTGCTTTGTTATATTGCCTCCATATTTGAGTGTTTACCTTTACCGTGCTTTTTTTATTTTTAGTTTCATTTCCCAAATTGAGATACTGCTAGGAAGATTTAGTTTGTGCACTATGCAACTCAACATGGGTAGTTCTGTTAGTGTTGTAAGAGGTTCACCTCCTAATGGTAGTTCTGGGAGGCCTACGGCTCTTCCTGCTGCTGCATGGGGTACACGGGCTACAAATTGTCACCCAGCTGCTGGAGGTCTTTTAGGTCCAAATGGATTGACCAAGCCCAAACCTGATACAATCAGTATTACACGAACCTTTTCCTCAGATGTTGCAGGCACAATTCAGGCCTCATTACATAGTGATGCGACAAAGAGGCCACTGTCGAGTGATGGGAGTCTTAGTATGACACCTGAAGTAAACAGTAATAGCGTGGATATCCTGGTTGGTGCTGGCGAAAAAACTTTGGCCTCTAATGTTTCTCTTGAACCTGTGAATTTGAACAGCCAGTTGTCTTCTCTGCCACTAGCCAGAGATAGTGATAGAGGGAGTTGCACTACATCAAACACCACAAATTCTGTTGATGTCACAACAAATTCTATTAGCAGCTTTGGTCCTGAGGAAGCAGTTACTTCTACCAATGAAGAGATTCAGAATTTGTCCTATGAGTTGTCCTCTGTTAACATTGATACAAATGGCCAAAATGAACACTACAACCTAACCAAACCTAGCAGTCCACCTGATTATGACTTGGTTAAATCTATGCAATCTCAAGGGTCACAGTCTAATGCTGGAAAATTTAGAGATGCAGTAATTACAAATGCAGGTGGTAAAACTTCTATATCAGATGATGGGGTTTGTAATTTAAAGGAGGAATATGATTTGAGATTGGATTCTCAATCTCAAGTAGTAAATGCTGAAGTGGAAGATGATGTGACATCTTTTGATAATCAGAGACTTAAGGATCCAGAAGTTGTTTCTCATTCTTATTTGCCAAACCCGAGTTTCCTTCATGTCTCAAACCATTCTAGTCCTCATCTTCTGCAGCGTGGTGAACCTTGTACTGTTGTAAATACTGTTTCTCTATCTGCAGATAATAAAATTGGGGATGACTCACTATTACATGGATCTAACATATTATGCAATGGATATCCTGAGAAATTGGTCAGCACCAGCTCTTATGGGATGCTTCATGAAAGGAAGGAGCAACGCATTGGAAGATTAGTTAATGAAGCAGTTAATATTGGAAGTGATGTTGCTATAGATAAGGGTGAGAGTAGTATAATTTCAAATATATTGTCCATGGAGTTTGATGCCTGGGATGACTCACTAATATCTTCCGACAGTTTGGCCAAGTTGTTGGGTGACAACACTGACAACCAGAATGGTCCACTAAAGAAATCTAGTTCTTGGAAAGTTCAAAGTAATCAATCCAGATTTTCTTTTGCAAGACAGGAGGAATCCAAAATTCAAGCCTTGGATGTACATCCATCTCATGGTGCAAACCAACAATTTCCAAGGAGCCGCTCACTCATCCAGGATTTTGTGGAAAGAGACTTGTCTTTGGACAAAATGGGTATTGCAAATGGCTTCCCTGCCAATAACCTCAAGGAATCTGAGAGTTTAGGCAGTGGTCATTTTGTTGCTTCTTCTAATAAGCTTTCTGCTGTTTCAAGACCACAAATTTCTGCCCCGCCAGGATTTTCAGTTCCAAGCCGGTCACCACCTCCTGGTTTTTCCTCCCATGAGAGAATGGGGCAGGCTTTTGACTCCATTTCTGGGAATTCATTGCTCGATCCTTCTTTCTTACTGAGAAATTCATATCAGGCACCCTCAACTGGAAATATTAGTGGTGCAGGAGACATTGAATTTATGGATCCTGCTATTTTGGCAGTTGGTAAAGGAAGACTTCATGGTGCATTAAACAGCCCAGCATTGGACATGCGATCTAATTACCCCCCTCAATTAAATTATTTGGAAAGTGAGGCTAGACTTCAATTATTGATGCAAAGATCTCTCTCACCACAGCAAAACCTTCGATTTTCTGAAATTGGGAACACTTTTTCTCAGCTTGGTGATTCTTATGGCATTTCTTCACGGTTAGATCAATCACAAGTCAGTAATCTGGCCTCATTTCCTCAGTTGTCTTTGCAGCAGTCTCGAAATGCTATGTTGTCAAATGGCCAATGGGATGGGTGGAATGAAGTGCAGAGTGGAAATAGTATGGGTATGGCGGAGCTTTTGAGAAATGAAAGACTTGGATTTAGCAAGTTTTATAGAGGATATGATGATTCAAAATTTCGGATGCCAAATTCTGGGGATCTGTACAACAGGACATTTGGGATTTGA 2463 0.4093 MQRRSGNVLPPPLDDCANNSSGKPIVKNASSVGSLFHASFNSCFVILPPYLSVYLYRAFFIFSFISQIEILLGRFSLCTMQLNMGSSVSVVRGSPPNGSSGRPTALPAAAWGTRATNCHPAAGGLLGPNGLTKPKPDTISITRTFSSDVAGTIQASLHSDATKRPLSSDGSLSMTPEVNSNSVDILVGAGEKTLASNVSLEPVNLNSQLSSLPLARDSDRGSCTTSNTTNSVDVTTNSISSFGPEEAVTSTNEEIQNLSYELSSVNIDTNGQNEHYNLTKPSSPPDYDLVKSMQSQGSQSNAGKFRDAVITNAGGKTSISDDGVCNLKEEYDLRLDSQSQVVNAEVEDDVTSFDNQRLKDPEVVSHSYLPNPSFLHVSNHSSPHLLQRGEPCTVVNTVSLSADNKIGDDSLLHGSNILCNGYPEKLVSTSSYGMLHERKEQRIGRLVNEAVNIGSDVAIDKGESSIISNILSMEFDAWDDSLISSDSLAKLLGDNTDNQNGPLKKSSSWKVQSNQSRFSFARQEESKIQALDVHPSHGANQQFPRSRSLIQDFVERDLSLDKMGIANGFPANNLKESESLGSGHFVASSNKLSAVSRPQISAPPGFSVPSRSPPPGFSSHERMGQAFDSISGNSLLDPSFLLRNSYQAPSTGNISGAGDIEFMDPAILAVGKGRLHGALNSPALDMRSNYPPQLNYLESEARLQLLMQRSLSPQQNLRFSEIGNTFSQLGDSYGISSRLDQSQVSNLASFPQLSLQQSRNAMLSNGQWDGWNEVQSGNSMGMAELLRNERLGFSKFYRGYDDSKFRMPNSGDLYNRTFGI. 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09151 820 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 1 814 IPR039780 GO:0004842|GO:0030014
Seca4g09151 820 MobiDBLite consensus disorder prediction 215 238 - -
Seca4g09151 820 MobiDBLite consensus disorder prediction 1 20 - -
Seca4g09151 820 MobiDBLite consensus disorder prediction 598 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09151 Seca-Chr4 217212379 217216706 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09151 K10643 - gmx:100796804 1030.39